Evidence map›Paper›PMID 30311909›Full record

ArticleeLife2018

WNT signaling memory is required for ACTIVIN to function as a morphogen in human gastruloids.

Anna Yoney, Fred Etoc, Albert Ruzo, Thomas Carroll, Jakob J Metzger, Iain Martyn, Shu Li, Christoph Kirst, Eric D Siggia, Ali H Brivanlou

Open access · goldAbstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 85 citations in OpenAlex.

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  20. Modeling development using hydrogels.Development (Cambridge, England) · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Anna YoneyLaboratory of Stem Cell Biology and Molecular Embryology, The Rockefeller University, New York, United States.ORCID 0000-0003-4988-9237
Fred EtocLaboratory of Stem Cell Biology and Molecular Embryology, The Rockefeller University, New York, United States.
Albert RuzoLaboratory of Stem Cell Biology and Molecular Embryology, The Rockefeller University, New York, United States.
Thomas CarrollBioinformatics Resource Center, The Rockefeller University, New York, United States.
Jakob J MetzgerLaboratory of Stem Cell Biology and Molecular Embryology, The Rockefeller University, New York, United States.
Iain MartynLaboratory of Stem Cell Biology and Molecular Embryology, The Rockefeller University, New York, United States.
Shu LiLaboratory of Stem Cell Biology and Molecular Embryology, The Rockefeller University, New York, United States.
Christoph KirstCenter for Studies in Physics and Biology, The Rockefeller University, New York, United States.ORCID 0000-0003-4867-5288
Eric D SiggiaCenter for Studies in Physics and Biology, The Rockefeller University, New York, United States.ORCID 0000-0001-7482-1854
Ali H BrivanlouLaboratory of Stem Cell Biology and Molecular Embryology, The Rockefeller University, New York, United States.ORCID 0000-0002-1761-280X
Rockefeller University · US

Funding

Dynamic readout of TGFb signaling and modeling of cell fate specification in humaR01GM101653 · NIGMS · ROCKEFELLER UNIVERSITY · PI BRIVANLOU, ALI H, SIGGIA, ERIC D. · 2012 to 2020
$2.6M
Dissecting embryonic axis formation using micropatterned hESC colony architectureR01HD080699 · NICHD · ROCKEFELLER UNIVERSITY · PI BRIVANLOU, ALI H, SIGGIA, ERIC D. · 2014 to 2018
$1.7M
NICHD NIH HHS R01 HD080699NICHD NIH HHS Research Project R01HD080699NIGMS NIH HHS R01 GM101653NIGMS NIH HHS Research Project R01GM101653
6 · The paper itself

Abstract

Self-organization of discrete fates in human gastruloids is mediated by a hierarchy of signaling pathways. How these pathways are integrated in time, and whether cells maintain a memory of their signaling history remains obscure. Here, we dissect the temporal integration of two key pathways, WNT and ACTIVIN, which along with BMP control gastrulation. CRISPR/Cas9-engineered live reporters of SMAD1, 2 and 4 demonstrate that in contrast to the stable signaling by SMAD1, signaling and transcriptional response by SMAD2 is transient, and while necessary for pluripotency, it is insufficient for differentiation. Pre-exposure to WNT, however, endows cells with the competence to respond to graded levels of ACTIVIN, which induces differentiation without changing SMAD2 dynamics. This cellular memory of WNT signaling is necessary for ACTIVIN morphogen activity. A re-evaluation of the evidence gathered over decades in model systems, re-enforces our conclusions and points to an evolutionarily conserved mechanism.

Indexed as

GastrulationWnt Signaling PathwayActivinsAnimalsBase SequenceBone Morphogenetic ProteinsCell DifferentiationEndodermGenes, ReporterHumansMesodermMiceNucleotide MotifsPluripotent Stem CellsRatsSmad ProteinsActivinsBone Morphogenetic ProteinsSmad ProteinsTransforming Growth Factor betadevelopmental biologyhumanlive imagingmesendoderm differentiationmicropatternsPluripotent stem cellsregenerative medicineSMAD signalingstem cellsWNT

Identifiers

PMID30311909
PMCPMC6234031
OpenAlexW2949967751

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.