Evidence map›Paper›PMID 30310872›Full record

ArticleHeliyon2018

Efficient construction of match strength distributions for uncertain multi-locus genotypes.

Mark W Perlin

Abstract read
In one paragraph

Article in Heliyon, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Validating TrueAlleleJournal of forensic sciences · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

Mark W PerlinCybergenetics, Pittsburgh, PA, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Natural variation in biological evidence leads to uncertain genotypes. Forensic comparison of a probabilistic genotype with a person's reference gives a numerical strength of DNA association. The distribution of match strength for all possible references usefully represents a genotype's potential information. But testing more genetic loci exponentially increases the number of multi-locus possibilities, making direct computation infeasible. At each locus, Bayesian probability can quickly assemble a match strength random variable. Multi-locus match strength is the sum of these independent variables. A multi-locus genotype's match strength distribution is efficiently constructed by convolving together the separate locus distributions. This convolution construction can accurately collate all trillion trillion reference outcomes in a fraction of a second. This paper shows how to rapidly construct multi-locus match strength distributions by convolution. Function convergence demonstrates that distribution accuracy increases with numerical resolution. Convolution construction has quadratic computational complexity, relative to the exponential number of reference genotypes. A suitably defined random variable reduces high-dimensional computational cost to fast real-line arithmetic. Match strength distributions are used in forensic validation studies. They provide error rates for match results. The convolution construction applies to discrete or continuous variables in the forensic, natural and social sciences. Computer-derived match strength distributions elicit the information inherent in DNA evidence, often overlooked by human analysis.

Indexed as

BioinformaticsBiotechnologyComputational biologyGeneticsMathematical biosciencesMolecular biology

Identifiers

PMID30310872
PMCPMC6176789

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.