Evidence map›Paper›PMID 30309984›Full record

ArticleThe Journal of biological chemistry2018

Metabolic origin of the fused aminoacyl-tRNA synthetase, glutamyl-prolyl-tRNA synthetase.

Sandeep M Eswarappa, Alka A Potdar, Sarthak Sahoo, Santhosh Sankar, Paul L Fox

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Article
  3. AKT-dependent nuclear localization of EPRS1 activates PARP1 in breast cancer cells.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Celebrating science's next generation.The Journal of biological chemistry · 2019
    Article
  11. Genetic code and metabolism: The perpetual waltz.The Journal of biological chemistry · 2018
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Sandeep M EswarappaFrom the Department of Biochemistry, Indian Institute of Science, Bengaluru 560012, India, sandeep@iisc.ac.in.
Alka A PotdarF. Widjaja Foundation Inflammatory Bowel and Immunobiology Research Institute, Cedars-Sinai Medical Center, Los Angeles, California 90048, and.
Sarthak SahooFrom the Department of Biochemistry, Indian Institute of Science, Bengaluru 560012, India.
Santhosh SankarFrom the Department of Biochemistry, Indian Institute of Science, Bengaluru 560012, India.
Paul L FoxDepartment of Cellular and Molecular Medicine, Lerner Research Institute, Cleveland Clinic, Cleveland, Ohio 44195 foxp@ccf.org.ORCID 0000-0002-6033-1528
Indian Institute of Science Bangalore · INCedars-Sinai Medical Center · USCleveland Clinic Lerner College of Medicine · US

Funding

Vascular Cell function and AtherosclerosisP01HL029582 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI FOX, PAUL L · 1985 to 2019
$32.0M
Structural Determinants Of Ceruloplasmin Inflammatory ActivityP01HL076491 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI PLOW, EDWARD FRANKLIN · 2004 to 2019
$27.3M
Mechanisms and Regulation of Programmed Translational ReadthroughR01GM115476 · NIGMS · CLEVELAND CLINIC LERNER COM-CWRU · PI FOX, PAUL L · 2016 to 2019
$1.2M
NHLBI NIH HHS P01 HL029582NHLBI NIH HHS P01 HL076491NIGMS NIH HHS R01 GM115476Wellcome Trust
6 · The paper itself

Abstract

About 1 billion years ago, in a single-celled holozoan ancestor of all animals, a gene fusion of two tRNA synthetases formed the bifunctional enzyme, glutamyl-prolyl-tRNA synthetase (EPRS). We propose here that a confluence of metabolic, biochemical, and environmental factors contributed to the specific fusion of glutamyl- (ERS) and prolyl- (PRS) tRNA synthetases. To test this idea, we developed a mathematical model that centers on the precursor-product relationship of glutamic acid and proline, as well as metabolic constraints on free glutamic acid availability near the time of the fusion event. Our findings indicate that proline content increased in the proteome during the emergence of animals, thereby increasing demand for free proline. Together, these constraints contributed to a marked cellular depletion of glutamic acid and its products, with potentially catastrophic consequences. In response, an ancient organism invented an elegant solution in which genes encoding ERS and PRS fused to form

Indexed as

Evolution, MolecularModels, ChemicalAmino Acyl-tRNA SynthetasesAnimalsBacteriaBacterial ProteinsCitric Acid CycleGene FusionGlutamate-tRNA LigaseGlutamic AcidKetoglutaric AcidsProlineProtein BiosynthesisAmino Acyl-tRNA SynthetasesBacterial ProteinsGlutamate-tRNA LigaseGlutamic Acidglutamyl-prolyl-tRNA synthetaseKetoglutaric AcidsProlineprolyl T RNA synthetaseaminoacyl tRNA synthetasecitric acid cycleEPRSevolutionfusion proteingene fusionglutamatemathematical modelingmolecular evolutiontricarboxylic acid cycle (TCA cycle) (Krebs cycle)

Identifiers

PMID30309984
PMCPMC6295713
OpenAlexW2897686517

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.