Evidence map›Paper›PMID 30309967›Full record

ArticlePlant physiology2019

Enzyme Fusion Removes Competition for Geranylgeranyl Diphosphate in Carotenogenesis.

Maurizio Camagna, Alexander Grundmann, Cornelia Bär, Julian Koschmieder, Peter Beyer, Ralf Welsch

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 86 citations in OpenAlex.

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  14. Mapping and Validation ofInternational journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Maurizio CamagnaFaculty of Biology, University of Freiburg, 79104 Freiburg, Germany.ORCID 0000-0001-6340-8079
Alexander GrundmannFaculty of Biology, University of Freiburg, 79104 Freiburg, Germany.
Cornelia BärFaculty of Biology, University of Freiburg, 79104 Freiburg, Germany.
Julian KoschmiederFaculty of Biology, University of Freiburg, 79104 Freiburg, Germany.ORCID 0000-0003-3901-3063
Peter BeyerFaculty of Biology, University of Freiburg, 79104 Freiburg, Germany.ORCID 0000-0003-0041-6543
Ralf WelschFaculty of Biology, University of Freiburg, 79104 Freiburg, Germany ralf.welsch@biologie.uni-freiburg.de.ORCID 0000-0002-2865-2743
University of Freiburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Geranylgeranyl diphosphate (GGPP), a prenyl diphosphate synthesized by GGPP synthase (GGPS), represents a metabolic hub for the synthesis of key isoprenoids, such as chlorophylls, tocopherols, phylloquinone, gibberellins, and carotenoids. Protein-protein interactions and the amphipathic nature of GGPP suggest metabolite channeling and/or competition for GGPP among enzymes that function in independent branches of the isoprenoid pathway. To investigate substrate conversion efficiency between the plastid-localized GGPS isoform GGPS11 and phytoene synthase (PSY), the first enzyme of the carotenoid pathway, we used recombinant enzymes and determined their in vitro properties. Efficient phytoene biosynthesis via PSY strictly depended on simultaneous GGPP supply via GGPS11. In contrast, PSY could not access freely diffusible GGPP or time-displaced GGPP supply via GGPS11, presumably due to liposomal sequestration. To optimize phytoene biosynthesis, we applied a synthetic biology approach and constructed a chimeric GGPS11-PSY metabolon (PYGG). PYGG converted GGPP to phytoene almost quantitatively in vitro and did not show the GGPP leakage typical of the individual enzymes.

Indexed as

ArabidopsisBinding, CompetitiveBiofortificationCarotenoidsGenetic EngineeringPolyisoprenyl PhosphatesRecombinant ProteinsSynthetic Biology(all-E) phytoeneCarotenoidsgeranylgeranyl pyrophosphatePolyisoprenyl PhosphatesRecombinant Proteins

Identifiers

PMID30309967
PMCPMC6393812
OpenAlexW2896822355

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.