Evidence map›Paper›PMID 30309881›Full record

ArticleRNA (New York, N.Y.)2019

Apobec1 complementation factor (A1CF) and RBM47 interact in tissue-specific regulation of C to U RNA editing in mouse intestine and liver.

Valerie Blanc, Yan Xie, Susan Kennedy, Jesse D Riordan, Deborah C Rubin, Blair B Madison, Jason C Mills, Joseph H Nadeau, Nicholas O Davidson

Open access · greenAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. HAMMER: Hairpin-based APOBEC3A-mediated mRNA editing reporter.bioRxiv : the preprint server for biology · 2026
    Article
  3. Review
  4. Article
  5. Article
  6. ADAR Family Proteins: A Structural Review.Current issues in molecular biology · 2024
    Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Valerie BlancDivision of Gastroenterology, Department of Medicine, Washington University School of Medicine, St. Louis, Missouri 63105, USA.
Yan XieDivision of Gastroenterology, Department of Medicine, Washington University School of Medicine, St. Louis, Missouri 63105, USA.
Susan KennedyDivision of Gastroenterology, Department of Medicine, Washington University School of Medicine, St. Louis, Missouri 63105, USA.
Jesse D RiordanPacific Northwest Research Institute, Seattle, Washington 98122, USA.
Deborah C RubinDivision of Gastroenterology, Department of Medicine, Washington University School of Medicine, St. Louis, Missouri 63105, USA.
Blair B MadisonDivision of Gastroenterology, Department of Medicine, Washington University School of Medicine, St. Louis, Missouri 63105, USA.
Jason C MillsDivision of Gastroenterology, Department of Medicine, Washington University School of Medicine, St. Louis, Missouri 63105, USA.
Joseph H NadeauPacific Northwest Research Institute, Seattle, Washington 98122, USA.
Nicholas O DavidsonDivision of Gastroenterology, Department of Medicine, Washington University School of Medicine, St. Louis, Missouri 63105, USA.ORCID 0000-0003-3166-2229
Washington University in St. Louis · USPacific Northwest Diabetes Research Institute · US

Funding

Washington University Center for Cellular ImagingP30CA091842 · NCI · WASHINGTON UNIVERSITY · PI AIMEE S JAMES · 2001 to 2026
$128.0M
Washington University DDRCC Supplemental Equipment RequestP30DK052574 · NIDDK · WASHINGTON UNIVERSITY · PI Nicholas O. Davidson · 2000 to 2026
$30.8M
Washington University Nutrition Obesity Research CenterP30DK056341 · NIDDK · WASHINGTON UNIVERSITY · PI Dominic N Reeds · 1999 to 2026
$30.2M
REGULATION OF ATROPHY-INDUCED PROGENITOR CELLS IN THE GASTRIC CORPUSR01DK094989 · NIDDK · WASHINGTON UNIVERSITY · PI Jason C Mills · 2012 to 2026
$6.1M
HEPATIC SYNTHESIS AND SECRETION OF APOLIPOPROTEIN (A)R01DK056260 · NIDDK · WASHINGTON UNIVERSITY · PI DAVIDSON, NICHOLAS O. · 1999 to 2017
$5.9M
MECHANISMS OF CHIEF CELL DEDIFFERENTIATIONR01DK105129 · NIDDK · WASHINGTON UNIVERSITY · PI Jason C Mills · 2015 to 2026
$5.4M
ENTEROHEPATIC LIPID FLUX AND APOPROTEIN BIOSYNTHESIS.R37HL038180 · NHLBI · WASHINGTON UNIVERSITY · PI DAVIDSON, NICHOLAS O. · 2000 to 2009
$5.1M
ENTEROHEPATIC LIPID FLUX AND APOPROTEIN BIOSYNTHESISR01HL038180 · NHLBI · WASHINGTON UNIVERSITY · PI DAVIDSON, NICHOLAS O. · 1986 to 2018
$3.8M
The Role of EBI3 in Regulating Gastritis and Gastric CarcinogenesisR01DK110406 · NIDDK · SAINT LOUIS UNIVERSITY · PI DIPAOLO, RICHARD J · 2016 to 2020
$2.3M
MYOFIBROBLAST REGULATION OF THE STEM CELL NICHE IN SHORT BOWEL SYNDROMER01DK106382 · NIDDK · WASHINGTON UNIVERSITY · PI RUBIN, DEBORAH C. · 2015 to 2018
$1.4M
Bile acid metabolomics and metagenomics in short bowel syndromeR01DK112378 · NIDDK · WASHINGTON UNIVERSITY · PI DAVIDSON, NICHOLAS O., RUBIN, DEBORAH C. · 2016 to 2018
$1.1M
Role of LIN28B in the regulation of intestinal epithelial growthK01DK093885 · NIDDK · WASHINGTON UNIVERSITY · PI MADISON, BLAIR BERNARD · 2012 to 2016
$647k
NCI NIH HHS P30 CA091842NHLBI NIH HHS R01 HL038180NHLBI NIH HHS R37 HL038180NIDDK NIH HHS F32 DK109651NIDDK NIH HHS K01 DK093885NIDDK NIH HHS P30 DK052574NIDDK NIH HHS P30 DK056341NIDDK NIH HHS R01 DK056260NIDDK NIH HHS R01 DK094989NIDDK NIH HHS R01 DK105129NIDDK NIH HHS R01 DK106382NIDDK NIH HHS R01 DK110406NIDDK NIH HHS R01 DK112378NIDDK NIH HHS R03 DK108764NIDDK NIH HHS R56 DK110406NIH HHS DK-052574NIH HHS DK-093885NIH HHS DK-108764NIH HHS DK110406NIH HHS DK-112378NIH HHS DK-56260NIH HHS HL-38180NIH HHS P30 CA091842
6 · The paper itself

Abstract

Mammalian C to U RNA is mediated by APOBEC1, the catalytic deaminase, together with RNA binding cofactors (including A1CF and RBM47) whose relative physiological requirements are unresolved. Although A1CF complements APOBEC1 for in vitro RNA editing,

Indexed as

RNA EditingAnimalsAPOBEC-1 DeaminaseBase SequenceGene Knockout TechniquesHeterogeneous-Nuclear RibonucleoproteinsIntestinal MucosaLiverMiceMice, KnockoutMice, TransgenicOrgan SpecificityRNA-Binding ProteinsRNA, Messengerapobec-1 complementation factor, mouseAPOBEC-1 DeaminaseApobec1 protein, mouseHeterogeneous-Nuclear RibonucleoproteinsRbm47 protein, mouseRNA-Binding ProteinsRNA, MessengerA1CFApoBAPOBEC1intestineliverRBM47

Identifiers

PMID30309881
PMCPMC6298562
OpenAlexW2896108254

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.