Evidence map›Paper›PMID 30308079›Full record

ArticlePloS one2018

Amino acid substitutions in CPC-LIKE MYB reveal residues important for protein stability in Arabidopsis roots.

Koh Yamada, Michiko Sasabe, Yukichi Fujikawa, Takuji Wada, Rumi Tominaga-Wada

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Article
  3. Ectopic Expression ofInternational journal of molecular sciences · 2022
    Article
  4. Localization of tomato (Plant signaling & behavior · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Koh YamadaSchool of Applied Biological Science, Hiroshima University, Higashi-Hiroshima, Japan.
Michiko SasabeFaculty of Agriculture and Life Science, Hirosaki University, Hirosaki, Japan.
Yukichi FujikawaGraduate School of Biosphere Science, Hiroshima University, Higashi-Hiroshima, Japan.
Takuji WadaGraduate School of Biosphere Science, Hiroshima University, Higashi-Hiroshima, Japan.
Rumi Tominaga-WadaGraduate School of Biosphere Science, Hiroshima University, Higashi-Hiroshima, Japan.ORCID 0000-0002-9939-346X
Hiroshima University · JPHirosaki University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

TRYPTICHON (TRY) and ENHANCER OF TRY AND CPC2 (ETC2) encode R3-type MYB transcription factors that are involved in epidermal cell differentiation in Arabidopsis thaliana. TRY and ETC2 belong to the CPC-like MYB gene family, which includes seven homolog genes. Previously, we showed that among the CPC family members, TRY and ETC2 are characterized by rapid proteolysis compared with that of other members, and we demonstrated that this proteolysis is mediated by the proteasome-dependent pathway. In this study, we compared the functions of the wild-type TRY and ETC2 proteins and their amino acid-substituted versions. Our results showed that the substitution of amino acids in the C-terminal of TRY and ETC2 conferred them the ability to induce root hair formation. Furthermore, we confirmed that these mutations enhanced the stability of the TRY and ETC2 proteins. These results revealed that the amino acids, which are important for the functions of TRY and ETC2, mediate morphological pattern formation and can be useful in understanding the pathway determining the fate of root hair cells.

Indexed as

Amino Acid SequenceAmino Acid SubstitutionArabidopsisArabidopsis ProteinsGene ExpressionPlant EpidermisPlant RootsPlants, Genetically ModifiedProtein StabilityTranscription FactorsArabidopsis ProteinsETC2 protein, ArabidopsisTranscription FactorsTRYPTICHON protein, Arabidopsis

Identifiers

PMID30308079
PMCPMC6181395
OpenAlexW2897487938

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.