Evidence map›Paper›PMID 30308007›Full record

ArticlePloS one2018

Thy1 transgenic mice expressing the red fluorescent calcium indicator jRGECO1a for neuronal population imaging in vivo.

Hod Dana, Ondrej Novak, Michael Guardado-Montesino, James W Fransen, Amy Hu, Bart G Borghuis, Caiying Guo, Douglas S Kim, Karel Svoboda

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 99 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Hod DanaJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, United States of America.ORCID 0000-0002-8093-2363
Ondrej NovakJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, United States of America.
Michael Guardado-MontesinoJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, United States of America.
James W FransenDepartment of Anatomical Sciences and Neurobiology, University of Louisville School of Medicine, Louisville, KY, United States of America.
Amy HuJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, United States of America.
Bart G BorghuisDepartment of Anatomical Sciences and Neurobiology, University of Louisville School of Medicine, Louisville, KY, United States of America.
Caiying GuoJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, United States of America.
Douglas S KimJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, United States of America.
Karel SvobodaJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, United States of America.
Howard Hughes Medical Institute · USUniversity of Louisville · US

Funding

Understanding signal processing in retinal bipolar cell pathwaysR01EY028188 · NEI · UNIVERSITY OF LOUISVILLE · PI BORGHUIS, BART GERARD · 2017 to 2021
$1.8M
Howard Hughes Medical InstituteNEI NIH HHS R01 EY028188
6 · The paper itself

Abstract

Calcium imaging is commonly used to measure the neural activity of large groups of neurons in mice. Genetically encoded calcium indicators (GECIs) can be delivered for this purpose using non-invasive genetic methods. Compared to viral gene transfer, transgenic targeting of GECIs provides stable long-term expression and obviates the need for invasive viral injections. Transgenic mice expressing the green GECI GCaMP6 are already widely used. Here we present the generation and characterization of transgenic mice expressing the sensitive red GECI jRGECO1a, driven by the Thy1 promoter. Four transgenic lines with different expression patterns showed sufficiently high expression for cellular in vivo imaging. We used two-photon microscopy to characterize visual responses of individual neurons in the visual cortex in vivo. The signal-to-noise ratio in transgenic mice was comparable to, or better than, mice transduced with adeno-associated virus. In addition, we show that Thy1-jRGECO1a transgenic mice are useful for transcranial population imaging and functional mapping using widefield fluorescence microscopy. We also demonstrate imaging of visual responses in retinal ganglion cells in vitro. Thy1-jRGECO1a transgenic mice are therefore a useful addition to the toolbox for imaging activity in intact neural networks.

Indexed as

AnimalsLuminescent ProteinsMiceMice, TransgenicMicroscopy, FluorescenceNeuronsPromoter Regions, GeneticSignal-To-Noise RatioThy-1 AntigensVisual CortexLuminescent ProteinsThy-1 Antigens

Identifiers

PMID30308007
PMCPMC6181368
OpenAlexW2950007293

What OpenQuestion holds

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LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.