Evidence map›Paper›PMID 30307990›Full record

ReviewPLoS genetics2018

Polynucleotide phosphorylase: Not merely an RNase but a pivotal post-transcriptional regulator.

Todd A Cameron, Lisa M Matz, Nicholas R De Lay

Open access · goldAbstract readReview
In one paragraph

Review in PLoS genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
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  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
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  12. Target recognition by RNase E RNA-binding domain AR2 drives sRNA decay in the absence of PNPase.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  13. SP1 and NFY Regulate the Expression ofInternational journal of molecular sciences · 2022
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Todd A CameronDepartment of Microbiology and Molecular Genetics, McGovern Medical School, University of Texas Health Science Center, Houston, Texas, United States of America.
Lisa M MatzDepartment of Microbiology and Molecular Genetics, McGovern Medical School, University of Texas Health Science Center, Houston, Texas, United States of America.
Nicholas R De LayDepartment of Microbiology and Molecular Genetics, McGovern Medical School, University of Texas Health Science Center, Houston, Texas, United States of America.ORCID 0000-0003-2249-7073
The University of Texas Health Science Center at Houston · USThe University of Texas MD Anderson Cancer Center · US

Funding

Systematic Analysis Of Small RNA-Based Regulation Of Gene Expression In BacteriaR01GM121368 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI DE LAY, NICHOLAS R. · 2017 to 2021
$1.7M
NIGMS NIH HHS R01 GM121368
6 · The paper itself

Abstract

Almost 60 years ago, Severo Ochoa was awarded the Nobel Prize in Physiology or Medicine for his discovery of the enzymatic synthesis of RNA by polynucleotide phosphorylase (PNPase). Although this discovery provided an important tool for deciphering the genetic code, subsequent work revealed that the predominant function of PNPase in bacteria and eukaryotes is catalyzing the reverse reaction, i.e., the release of ribonucleotides from RNA. PNPase has a crucial role in RNA metabolism in bacteria and eukaryotes mainly through its roles in processing and degrading RNAs, but additional functions in RNA metabolism have recently been reported for this enzyme. Here, we discuss these established and noncanonical functions for PNPase and the possibility that the major impact of PNPase on cell physiology is through its unorthodox roles.

Indexed as

AnimalsBacteriaEndoribonucleasesExoribonucleasesGene Expression RegulationGenetic CodeHumansPolyribonucleotide NucleotidyltransferaseRibonucleasesRNARNA, MessengerRNA, RibosomalRNA StabilityEndoribonucleasesExoribonucleasesPolyribonucleotide NucleotidyltransferaseRibonucleasesRNARNA, MessengerRNA, Ribosomal

Identifiers

PMID30307990
PMCPMC6181284
OpenAlexW2896037377

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.