Evidence map›Paper›PMID 30306890›Full record

ArticleeLife2018

Effects of microcompartmentation on flux distribution and metabolic pools in

Anika Küken, Frederik Sommer, Liliya Yaneva-Roder, Luke Cm Mackinder, Melanie Höhne, Stefan Geimer, Martin C Jonikas, Michael Schroda, Mark Stitt, Zoran Nikoloski and 1 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 47 citations in OpenAlex.

  1. Review
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  11. α-CAs from Photosynthetic Organisms.International journal of molecular sciences · 2022
    Review
  12. Modelling the pyrenoid-based CONature plants · 2022
    Article
  13. Reduction in Phosphoribulokinase Amount and Re-Routing Metabolism inInternational journal of molecular sciences · 2022
    Article
  14. Article
  15. Article
  16. Review
  17. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Anika KükenMax Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany.ORCID http://orcid.org/0000-0003-1367-0719
Frederik SommerMax Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany.
Liliya Yaneva-RoderMax Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany.
Luke Cm MackinderDepartment of Plant Biology, Carnegie Institution for Science, Stanford, United States.ORCID https://orcid.org/0000-0003-1440-3233
Melanie HöhneMax Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany.
Stefan GeimerInstitute of Cell Biology, University of Bayreuth, Bayreuth, Germany.
Martin C JonikasDepartment of Plant Biology, Carnegie Institution for Science, Stanford, United States.
Michael SchrodaMax Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany.
Mark StittMax Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany.
Zoran NikoloskiMax Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany.ORCID http://orcid.org/0000-0003-2671-6763
Tabea Mettler-AltmannMax Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany.ORCID http://orcid.org/0000-0002-9161-4889
Max Planck Institute of Molecular Plant Physiology · DECarnegie Institution for Science · USUniversity of Kaiserslautern · DEUniversity of Potsdam · DEUniversity of Bayreuth · DE

Funding

Transforming our understanding of eukaryotic gene functions through chemical genetics in the green alga Chlamydomonas reinhardtiiDP2GM119137 · NIGMS · PRINCETON UNIVERSITY · PI JONIKAS, MARTIN CASIMIR · 2015 to 2015
$2.4M
Howard Hughes Medical Institute 55108535NIH HHS DP2-GM-119137
6 · The paper itself

Abstract

Cells and organelles are not homogeneous but include microcompartments that alter the spatiotemporal characteristics of cellular processes. The effects of microcompartmentation on metabolic pathways are however difficult to study experimentally. The pyrenoid is a microcompartment that is essential for a carbon concentrating mechanism (CCM) that improves the photosynthetic performance of eukaryotic algae. Using

Indexed as

Cell CompartmentationMetabolic Flux AnalysisCarbonCarbon CycleCarbon DioxideChlamydomonas reinhardtiiChloroplastsMetabolomeModels, BiologicalPhotosynthesisCarbonCarbon Dioxidebiochemistrycarbon fixationchemical biologychlamydomonas reinhardtiiChlamydomonas reinhardtiimathematical modelmicrocompartmentplant biologypyrenoidsystems modeling

Identifiers

PMID30306890
PMCPMC6235561
OpenAlexW2897984166

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.