Evidence map›Paper›PMID 30306701›Full record

ArticleJournal of magnetic resonance imaging : JMRI2019

3D convolutional neural networks for detection and severity staging of meniscus and PFJ cartilage morphological degenerative changes in osteoarthritis and anterior cruciate ligament subjects.

Valentina Pedoia, Berk Norman, Sarah N Mehany, Matthew D Bucknor, Thomas M Link, Sharmila Majumdar

Open access · greenAbstract read
In one paragraph

Article in Journal of magnetic resonance imaging : JMRI, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers, 5 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed, 5 pooled it
13.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 5 syntheses or guidelines pooled it, 163 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Pooled it
  6. Article
  7. Article
  8. Review
  9. Review
  10. Review
  11. Review
  12. Article
  13. Review
  14. Review
  15. Article
  16. Review
  17. Achieving high accuracy in meniscus tear detection using advanced deep learning models with a relatively small data set.Knee surgery, sports traumatology, arthroscopy : official journal of the ESSKA · 2025
    Article
  18. Article
  19. Article
  20. Article

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Valentina PedoiaDepartment of Radiology and Biomedical Imaging, University of California, San Francisco, California, USA.
Berk NormanDepartment of Radiology and Biomedical Imaging, University of California, San Francisco, California, USA.
Sarah N MehanyDepartment of Radiology and Biomedical Imaging, University of California, San Francisco, California, USA.
Matthew D BucknorDepartment of Radiology and Biomedical Imaging, University of California, San Francisco, California, USA.
Thomas M LinkDepartment of Radiology and Biomedical Imaging, University of California, San Francisco, California, USA.
Sharmila MajumdarDepartment of Radiology and Biomedical Imaging, University of California, San Francisco, California, USA.
University of California System · USUniversity of California, San Francisco · USDigital Health Cooperative Research Centre

Funding

Translation of Quantitative Imaging in OsteoarthritisP50AR060752 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SOUZA, RICHARD BRIAN · 2011 to 2015
$6.2M
Deep Learning for Characterizing Knee Joint Degeneration Predicting Progression of Osteoarthritis and Total Knee ReplacementR61AR073552 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MAJUMDAR, SHARMILA, PEDOIA, VALENTINA · 2018 to 2019
$871k
Multidimensional MRI-based Non-Euclidean Deep Learning to Study OsteoarthritisR00AR070902 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI PEDOIA, VALENTINA · 2018 to 2020
$747k
Multidimensional MRI-based Big Data Analytics to Study OsteoarthritisK99AR070902 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI PEDOIA, VALENTINA · 2017 to 2017
$94k
NIAMS NIH HHS K99 AR070902NIAMS NIH HHS P50 AR060752NIAMS NIH HHS R00 AR070902NIAMS NIH HHS R61 AR073552
6 · The paper itself

Abstract

backgroundSemiquantitative assessment of MRI plays a central role in musculoskeletal research; however, in the clinical setting MRI reports often tend to be subjective and qualitative. Grading schemes utilized in research are not used because they are extraordinarily time-consuming and unfeasible in clinical practice. PURPOSE: To evaluate the ability of deep-learning models to detect and stage severity of meniscus and patellofemoral cartilage lesions in osteoarthritis and anterior cruciate ligament (ACL) subjects. STUDY TYPE: Retrospective study aimed to evaluate a technical development. POPULATION: In all, 1478 MRI studies, including subjects at various stages of osteoarthritis and after ACL injury and reconstruction. FIELD STRENGTH/SEQUENCE: 3T MRI, 3D FSE CUBE. ASSESSMENT: Automatic segmentation of cartilage and meniscus using 2D U-Net, automatic detection, and severity staging of meniscus and cartilage lesion with a 3D convolutional neural network (3D-CNN). STATISTICAL TESTS: Receiver operating characteristic (ROC) curve, specificity and sensitivity, and class accuracy.

resultsSensitivity of 89.81% and specificity of 81.98% for meniscus lesion detection and sensitivity of 80.0% and specificity of 80.27% for cartilage were achieved. The best performances for staging lesion severity were obtained by including demographics factors, achieving accuracies of 80.74%, 78.02%, and 75.00% for normal, small, and complex large lesions, respectively. DATA

conclusionIn this study we provide a proof of concept of a fully automated deep-learning pipeline that can identify the presence of meniscal and patellar cartilage lesions. This pipeline has also shown potential in making more in-depth examinations of lesion subjects for multiclass prediction and severity staging. LEVEL OF EVIDENCE: 2 Technical Efficacy: Stage 2 J. Magn. Reson. Imaging 2019;49:400-410.

Indexed as

Imaging, Three-DimensionalMagnetic Resonance ImagingNeural Networks, ComputerAdultAgedAnterior Cruciate LigamentAnterior Cruciate Ligament InjuriesAnterior Cruciate Ligament ReconstructionCartilage, ArticularFalse Positive ReactionsFemaleHumansMaleMeniscusMiddle AgedOsteoarthritis, Knee

Identifiers

PMID30306701
PMCPMC6521715
OpenAlexW2897451575

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.