Evidence map›Paper›PMID 30305047›Full record

ArticleBMC plant biology2018

Transcriptome analysis of radish sprouts hypocotyls reveals the regulatory role of hydrogen-rich water in anthocyanin biosynthesis under UV-A.

Xiaoyan Zhang, Nana Su, Li Jia, Jiyuan Tian, Han Li, Lisha Huang, Zhenguo Shen, Jin Cui

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
8.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 53 citations in OpenAlex.

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  19. Single-Molecule Long-Read Sequencing of Purslane (Plants (Basel, Switzerland) · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Xiaoyan ZhangCollege of Life Sciences, Nanjing Agricultural University, Nanjing, China.
Nana SuCollege of Life Sciences, Nanjing Agricultural University, Nanjing, China.
Li JiaCollege of Life Sciences, Nanjing Agricultural University, Nanjing, China.
Jiyuan TianCollege of Life Sciences, Nanjing Agricultural University, Nanjing, China.
Han LiCollege of Life Sciences, Nanjing Agricultural University, Nanjing, China.
Lisha HuangBiomics Biotech Co. Ltd, Beijing, China.
Zhenguo ShenCollege of Life Sciences, Nanjing Agricultural University, Nanjing, China.
Jin CuiCollege of Life Sciences, Nanjing Agricultural University, Nanjing, China. cuijin@njau.edu.cn.
Nanjing Agricultural University · CN

Funding

National Natural Science Foundation of China 31572169
6 · The paper itself

Abstract

backgroundHydrogen gas (H

resultsFour cDNA libraries from radish sprout hypocotyls were constructed, and a total of 14,564 differentially expressed genes (DEGs) were identified through pairwise comparisons. By Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis, these unigenes were found to be implicated in light signal perception and transduction, starch and sucrose metabolism, photosynthesis, nitrogen metabolism and biosynthesis of secondary metabolites. The MYB-bHLH-WD40 complex accounted for the majority of the transcription factors found to be involved in anthocyanin biosynthesis, and levels of transcripts for this complex were in accordance with the anthocyanin concentrations observed. In addition, other transcription factors (such as NAC, bZIP and TCP) might participate in HRW-promoted anthocyanin biosynthesis. Furthermore, the signaling processes of plant hormones, MAPKs and Ca

conclusionsTaken together, the results of this study may expand our understanding of HRW-promoted anthocyanin accumulation under UV-A in radish sprouts.

Indexed as

AnthocyaninsGene Expression ProfilingGene Expression Regulation, PlantHydrogenHypocotylMolecular Sequence AnnotationRaphanusReal-Time Polymerase Chain ReactionReproducibility of ResultsTranscription FactorsUltraviolet RaysWaterAnthocyaninsHydrogenTranscription FactorsWaterAnthocyaninMolecular hydrogenRadish sproutsTranscriptomeUV-A

Identifiers

PMID30305047
PMCPMC6180623
OpenAlexW2896665265

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.