Evidence map›Paper›PMID 30305041›Full record

ArticleBMC cancer2018

Genomic analysis of DNA repair genes and androgen signaling in prostate cancer.

Kasey Jividen, Katarzyna Z Kedzierska, Chun-Song Yang, Karol Szlachta, Aakrosh Ratan, Bryce M Paschal

Open access · goldAbstract read
In one paragraph

Article in BMC cancer, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
6.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 73 citations in OpenAlex.

  1. Lack of synergy between AR-targeted therapies and PARP inhibitors in homologous recombination-proficient prostate cancer.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Genomic Characterization of Preclinical Prostate Cancer Cell Line Models.International journal of molecular sciences · 2024
    Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Kasey JividenCenter for Cell Signaling, University of Virginia, Charlottesville, VA, USA.
Katarzyna Z KedzierskaCenter for Public Health Genomics, University of Virginia, Charlottesville, VA, USA.
Chun-Song YangCenter for Cell Signaling, University of Virginia, Charlottesville, VA, USA.
Karol SzlachtaDepartment of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA, USA.
Aakrosh RatanCenter for Public Health Genomics, University of Virginia, Charlottesville, VA, USA.
Bryce M PaschalCenter for Cell Signaling, University of Virginia, Charlottesville, VA, USA. paschal@virginia.edu.
University of Virginia · US

Funding

Cancer Research Training Program: From Molecular Mechanisms to Therapeutic StrategiesT32CA009109 · NCI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI Andrew Carl Dudley, Melanie R Rutkowski · 1985 to 2026
$13.9M
Parp Function in Prostate CancerR01CA214872 · NCI · UNIVERSITY OF VIRGINIA · PI Bryce Paschal · 2017 to 2026
$3.6M
National Cancer Institute CA214872NCI NIH HHS R01 CA214872NCI NIH HHS T32 CA009109
6 · The paper itself

Abstract

backgroundThe cellular effects of androgen are transduced through the androgen receptor, which controls the expression of genes that regulate biosynthetic processes, cell growth, and metabolism. Androgen signaling also impacts DNA damage signaling through mechanisms involving gene expression and transcription-associated DNA damaging events. Defining the contributions of androgen signaling to DNA repair is important for understanding androgen receptor function, and it also has translational implications.

methodsWe generated RNA-seq data from multiple prostate cancer lines and used bioinformatic analyses to characterize androgen-regulated gene expression. We compared the results from cell lines with gene expression data from prostate cancer xenografts, and patient samples, to query how androgen signaling and prostate cancer progression influences the expression of DNA repair genes. We performed whole genome sequencing to help characterize the status of the DNA repair machinery in widely used prostate cancer lines. Finally, we tested a DNA repair enzyme inhibitor for effects on androgen-dependent transcription.

resultsOur data indicates that androgen signaling regulates a subset of DNA repair genes that are largely specific to the respective model system and disease state. We identified deleterious mutations in the DNA repair genes RAD50 and CHEK2. We found that inhibition of the DNA repair enzyme MRE11 with the small molecule mirin inhibits androgen-dependent transcription and growth of prostate cancer cells.

conclusionsOur data supports the view that crosstalk between androgen signaling and DNA repair occurs at multiple levels, and that DNA repair enzymes in addition to PARPs, could be actionable targets in prostate cancer.

Indexed as

AndrogensAnimalsDNA, NeoplasmDNA RepairGene Expression Regulation, NeoplasticHumansMalePC-3 CellsProstatic NeoplasmsProtein Kinase InhibitorsReceptors, AndrogenSignal TransductionTranscription, GeneticAndrogensDNA, NeoplasmProtein Kinase InhibitorsReceptors, AndrogenAndrogen receptorDNA repair and DNA damage responseProstate cancer

Identifiers

PMID30305041
PMCPMC6180441
OpenAlexW2897547720

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.