Evidence map›Paper›PMID 30305024›Full record

ArticleBMC genomics2018

High throughput small RNA and transcriptome sequencing reveal capacitation-related microRNAs and mRNA in boar sperm.

Yuan Li, Rong-Hong Li, Ming-Xia Ran, Yan Zhang, Kai Liang, Ying-Nan Ren, Wen-Cheng He, Ming Zhang, Guang-Bin Zhou, Izhar Hyder Qazi and 1 more

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 52 citations in OpenAlex.

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  14. Testis-Specific Isoform of NaInternational journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Yuan LiCollege of Animal Sciences and Technology, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China.
Rong-Hong LiCollege of Animal Sciences and Technology, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China.
Ming-Xia RanCollege of Animal Sciences and Technology, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China.
Yan ZhangCollege of Animal Sciences and Technology, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China.
Kai LiangCollege of Animal Sciences and Technology, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China.
Ying-Nan RenCollege of Animal Sciences and Technology, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China.
Wen-Cheng HeCollege of Animal Sciences and Technology, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China.
Ming ZhangCollege of Animal Sciences and Technology, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China.
Guang-Bin ZhouCollege of Animal Sciences and Technology, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China.
Izhar Hyder QaziCollege of Animal Sciences and Technology, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China.
Chang-Jun ZengCollege of Animal Sciences and Technology, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China. zengchj@sicau.edu.cn.ORCID http://orcid.org/0000-0002-9797-4551
Sichuan Agricultural University · CNShaheed Benazir Bhutto University · PK

Funding

National Natural Science Foundation of China 31570533
6 · The paper itself

Abstract

backgroundCapacitation, a prerequisite for oocyte fertilization, is a complex process involving series of structural and functional changes in sperms such as membrane modifications, modulation of enzyme activities, and protein phosphorylation. In order to penetrate and fertilize an oocyte, mammalian sperms must undergo capacitation. Nevertheless, the process of sperm capacitation remains poorly understood and requires further elucidation. In the current study, via high throughput sequencing, we identified and explored the differentially expressed microRNAs (miRNAs) and mRNAs involved in boar sperm capacitation.

resultsWe identified a total of 5342 mRNAs and 204 miRNAs that were differentially expressed in fresh and capacitated boar sperms. From these, 12 miRNAs (8 known and 4 newly identified miRNAs) and their differentially expressed target mRNAs were found to be involved in sperm capacitation-related PI3K-Akt, MAPK, cAMP-PKA and Ca

conclusionsOur study is first to provide the complete miRNA and transcriptome profiles of boar sperm. Our findings provide important insights for the understanding of the RNA profile in boar sperm and future elucidation of the underlying molecular mechanism relevant to mammalian sperm capacitation.

Indexed as

Gene Expression ProfilingAnimalsGene OntologyHigh-Throughput Nucleotide SequencingMaleMicroRNAsRNA, MessengerSpermatozoaSperm CapacitationSwineMicroRNAsRNA, MessengerBoarHigh throughput sequencingmiRNAsSperm capacitationTranscriptome

Identifiers

PMID30305024
PMCPMC6180635
OpenAlexW2897996100

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.