Evidence map›Paper›PMID 30303564›Full record

ArticleMagnetic resonance in medicine2019

Lesion segmentation for MR spectroscopic imaging using the convolution difference method.

Andrew A Maudsley

Abstract read
In one paragraph

Article in Magnetic resonance in medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

1 author.

Andrew A MaudsleyDepartment of Radiology, University of Miami School of Medicine, Miami, Florida.ORCID 0000-0001-7653-3063

Funding

Multiparametric Volumetric MR Characterization of Intracranial LesionsR01CA172210 · NCI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI MAUDSLEY, ANDREW A. · 2014 to 2018
$2.7M
Development and Maintenance of Software for MR Spectroscopic ImagingR01EB016064 · NIBIB · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI MAUDSLEY, ANDREW A. · 2013 to 2021
$2.0M
NCI NIH HHS R01 CA172210NCI NIH HHS R01CA172210NIBIB NIH HHS R01 EB016064NIBIB NIH HHS R01EB016064NIH HHS 20-2009NIH HHS R01CA172210NIH HHS R01EB016064
6 · The paper itself

Abstract

purposeDelineation of lesion boundaries from volumetric MRSI metabolite ratio maps using a method that accounts for the spatial response function of the acquisition and variable spectral quality and is robust to signal heterogeneity within the lesion.

methodsA novel method for lesion segmentation, termed convolution difference, has been developed that is robust to signal heterogeneity within the lesion and to differences in the spatial response function. Procedures are described for processing metabolite ratio maps and to exclude regions of inadequate spectral quality. This method was evaluated using computer simulations, and the results were compared with an iterative thresholding technique that determines an optimal amplitude threshold, and with the use of a fixed amplitude threshold. These methods were evaluated for segmentation of volumetric MRSI studies of gliomas using maps of the choline to N-acetylaspartate ratio, and a qualitative comparison of lesion volumes carried out.

resultsSimulation studies indicated improved performance for the convolution difference method when applied to ratio maps. Variations in tumor volume were observed for the in vivo studies between the convolution difference and the iterative thresholding methods; however, visual analysis indicates that both showed improved accuracy in comparison to using a fixed amplitude threshold.

conclusionThis study reinforces previous reports indicating that the use of fixed threshold values for segmentation of maps with broad spatial response functions can result in errors in lesion volume definition. A novel segmentation method, termed the convolution difference, has been introduced and demonstrated to be robust for segmentation of volumetric MRSI metabolite data.

Indexed as

Magnetic Resonance SpectroscopyAlgorithmsAspartic AcidBrainBrain MappingBrain NeoplasmsCholineComputer SimulationGliomaHumansImage Processing, Computer-AssistedReproducibility of ResultsTumor BurdenAspartic AcidCholineN-acetylaspartatebrainconvolution differencelesion segmentationmagnetic resonance spectroscopic imagingMRSI

Identifiers

PMID30303564
PMCPMC6347534

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.