Evidence map›Paper›PMID 30302201›Full record

ArticleInternational journal of hematologic oncology2016

Dielectrophoretic recovery of DNA from plasma for the identification of chronic lymphocytic leukemia point mutations.

Sareh Manouchehri, Stuart Ibsen, Jennifer Wright, Laura Rassenti, Emanuela M Ghia, George F Widhopf, Thomas J Kipps, Michael J Heller

Open access · greenAbstract read
In one paragraph

Article in International journal of hematologic oncology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Sareh ManouchehriDepartment of Bioengineering, University of California San Diego, La Jolla, CA 92093, USA.
Stuart IbsenDepartment of Bioengineering, University of California San Diego, La Jolla, CA 92093, USA.
Jennifer WrightDepartment of Bioengineering, University of California San Diego, La Jolla, CA 92093, USA.
Laura RassentiDepartment of Nanoengineering, University of California San Diego, La Jolla, CA 92093, USA.
Emanuela M GhiaDepartment of Nanoengineering, University of California San Diego, La Jolla, CA 92093, USA.
George F WidhopfDepartment of Nanoengineering, University of California San Diego, La Jolla, CA 92093, USA.
Thomas J KippsDepartment of Nanoengineering, University of California San Diego, La Jolla, CA 92093, USA.
Michael J HellerDepartment of Bioengineering, University of California San Diego, La Jolla, CA 92093, USA.
University of California, San Diego · USLa Jolla Bioengineering Institute · US

Funding

Tumor Therapy/Annihilation Using a Smart NanoPlatform (SNaP)U54CA119335 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ESENER, SADIK · 2005 to 2010
$21.2M
CLL Mutation Detection and Monitoring from Blood using AC ElectrokineticsR43CA183414 · NCI · BIOLOGICAL DYNAMICS, INC. · PI KRISHNAN, RAJARAM · 2014 to 2014
$225k
NCI NIH HHS R43 CA183414NCI NIH HHS U54 CA119335
6 · The paper itself

Abstract

aimCirculating cell free (ccf) DNA contains information about mutations affecting chronic lymphocytic leukemia (CLL). The complexity of isolating DNA from plasma inhibits the development of point-of-care diagnostics. Here, we introduce an electrokinetic method that enables rapid recovery of DNA from plasma. MATERIALS &

methodsccf-DNA was isolated from 25 µl of CLL plasma using dielectrophoresis. The DNA was used for PCR amplification, sequencing and analysis.

resultsThe ccf-DNA collected from plasma of 5 CLL patients revealed identical mutations to those previously identified by extracting DNA from CLL cells from the same patients.

conclusionRapid dielectrophoresis isolation of ccf-DNA directly from plasma provides sufficient amounts of DNA to use for identification of point mutations in genes associated with CLL progression.

Indexed as

biomarkerschronic lymphocytic leukemiacirculating cell free DNAdielectrophoresiselectrokineticgeneticspoint mutations

Identifiers

PMID30302201
PMCPMC6171991
OpenAlexW2409536809

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.