Evidence map›Paper›PMID 30301849›Full record

ArticlemBio2018

Rethinking the Coral Microbiome: Simplicity Exists within a Diverse Microbial Biosphere.

Alejandra Hernandez-Agreda, William Leggat, Pim Bongaerts, César Herrera, Tracy D Ainsworth

Abstract read
In one paragraph

Article in mBio, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
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  6. Review
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  11. PeerJ · 2025
    Article
  12. Influence of reef habitat on coral microbial associations.Environmental microbiology reports · 2024
    Article
  13. Article
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  18. Article
  19. iScience · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Alejandra Hernandez-AgredaAustralian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, Australia alejandra.hernandezagreda@my.jcu.edu.au.
William LeggatAustralian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, Australia.
Pim BongaertsGlobal Change Institute, The University of Queensland, Brisbane, Australia.
César HerreraTropWATER, Centre for Tropical Water & Aquatic Ecosystem Research, James Cook University, Townsville, Australia.
Tracy D AinsworthAustralian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Studies of the coral microbiome predominantly characterize the microbial community of the host species as a collective, rather than that of the individual. This ecological perspective on the coral microbiome has led to the conclusion that the coral holobiont is the most diverse microbial biosphere studied thus far. However, investigating the microbiome of the individual, rather than that of the species, highlights common and conserved community attributes which can provide insights into the significance of microbial associations to the host. Here, we show there are consistent characteristics between individuals in the proposed three components of the coral microbiome (i.e., "environmentally responsive community," "resident or individual microbiome," and "core microbiome"). We found that the resident microbiome of a photoendosymbiotic coral harbored <3% (∼605 phylotypes) of the 16S rRNA phylotypes associated with all investigated individuals of that species ("species-specific microbiome") (∼21,654 phylotypes; individuals from

Indexed as

Host Microbial InteractionsMicrobiotaAnimalsAnthozoaBacteriaGenetic VariationPhylogenyRNA, Ribosomal, 16SSpecies SpecificitySymbiosisRNA, Ribosomal, 16Sbacteriacoralholobiontmicrobiomesymbiosis

Identifiers

PMID30301849
PMCPMC6178627

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.