Evidence map›Paper›PMID 30301767›Full record

ArticleThe Journal of biological chemistry2018

Three structurally and functionally distinct β-glucuronidases from the human gut microbe

Samuel J Pellock, William G Walton, Kristen A Biernat, Dariana Torres-Rivera, Benjamin C Creekmore, Yongmei Xu, Jian Liu, Ashutosh Tripathy, Lance J Stewart, Matthew R Redinbo

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 65 citations in OpenAlex.

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  11. Integrating the gut microbiome and pharmacology.Science translational medicine · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Samuel J PellockFrom the Departments of Chemistry.
William G WaltonFrom the Departments of Chemistry.
Kristen A BiernatFrom the Departments of Chemistry.
Dariana Torres-RiveraFrom the Departments of Chemistry.
Benjamin C CreekmoreFrom the Departments of Chemistry.
Yongmei XuChemical Biology and Medicinal Chemistry, and.
Jian LiuChemical Biology and Medicinal Chemistry, and.
Ashutosh TripathyBiochemistry and Biophysics, and.
Lance J Stewartthe Department of Biochemistry, Institute for Protein Design, University of Washington, Seattle, Washington 98195.
Matthew R RedinboFrom the Departments of Chemistry, redinbo@unc.edu.
Institute of Molecular Biology and Biophysics · RUUniversity of Washington · US

Funding

UNC-CH CENTER FOR ENVIRONMENTAL HEALTH &SUSCEPTIBILITYP30ES010126 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Stephanie Engel · 2001 to 2026
$36.3M
In vitro synthesis of recombinant heparan sulfateR01HL094463 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LIU, JIAN, PAWLINSKI, RAFAL L · 2009 to 2021
$5.2M
Improving CPT-11 Efficacy Using Structural BiologyR01CA098468 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI REDINBO, MATTHEW R · 2003 to 2018
$3.9M
Microbiome-Targeted Probes to Eliminate Chemotherapy-Induced GI ToxicityR01CA207416 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI REDINBO, MATTHEW R · 2016 to 2018
$1.7M
Uncovering the controlling mechanisms in heparan sulfate biosynthesisU01GM102137 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LIU, JIAN · 2013 to 2016
$1.2M
NCI NIH HHS R01 CA098468NCI NIH HHS R01 CA207416NHLBI NIH HHS R01 HL094463NIEHS NIH HHS P30 ES010126NIGMS NIH HHS U01 GM102137
6 · The paper itself

Abstract

The glycoside hydrolases encoded by the human gut microbiome play an integral role in processing a variety of exogenous and endogenous glycoconjugates. Here we present three structurally and functionally distinct β-glucuronidase (GUS) glycoside hydrolases from a single human gut commensal microbe,

Indexed as

Gastrointestinal MicrobiomeAmino Acid SequenceBacteroidesCatalytic DomainEnzyme InhibitorsGlucaric AcidGlucuronidaseHumansIsoenzymesProtein ConformationEnzyme InhibitorsGlucaric AcidGlucuronidaseIsoenzymessaccharolactonebacteroidescarbohydrate metabolismcrystallographydrug reactivationenzyme structureGI tractglucuronidaseglycoside hydrolasemicrobiomestructure-function

Identifiers

PMID30301767
PMCPMC6290157
OpenAlexW2897010318

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.