Evidence map›Paper›PMID 30301740›Full record

ArticleGenetics2018

Genome Instability Is Promoted by the Chromatin-Binding Protein Spn1 in

Alison K Thurston, Catherine A Radebaugh, Adam R Almeida, Juan Lucas Argueso, Laurie A Stargell

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. High frequency DNA rearrangement atCommunications biology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Alison K ThurstonDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, Colorado 80523.
Catherine A RadebaughDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, Colorado 80523.
Adam R AlmeidaDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, Colorado 80523.
Juan Lucas ArguesoDepartment of Environmental and Radiological Health Sciences, Colorado State University, Fort Collins, Colorado 80523.ORCID 0000-0002-7157-1519
Laurie A StargellDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, Colorado 80523 Laurie.Stargell@Colostate.edu.
Colorado State University · US

Funding

MinION long-read DNA sequencer system for the analysis of structural genomic variation in yeastR35GM119788 · NIGMS · COLORADO STATE UNIVERSITY · PI ARGUESO, JUAN LUCAS · 2016 to 2025
$3.7M
NIGMS NIH HHS R35 GM119788
6 · The paper itself

Abstract

Cells expend a large amount of energy to maintain their DNA sequence. DNA repair pathways, cell cycle checkpoint activation, proofreading polymerases, and chromatin structure are ways in which the cell minimizes changes to the genome. During replication, the DNA-damage tolerance pathway allows the replication forks to bypass damage on the template strand. This avoids prolonged replication fork stalling, which can contribute to genome instability. The DNA-damage tolerance pathway includes two subpathways: translesion synthesis and template switch. Post-translational modification of PCNA and the histone tails, cell cycle phase, and local DNA structure have all been shown to influence subpathway choice. Chromatin architecture contributes to maintaining genome stability by providing physical protection of the DNA and by regulating DNA-processing pathways. As such, chromatin-binding factors have been implicated in maintaining genome stability. Using

Indexed as

AgingChromatinDNA DamageDNA RepairDNA ReplicationGene Expression Regulation, FungalGenome, FungalGenomic InstabilitySaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsChromatinSaccharomyces cerevisiae ProteinsSPN1 protein, S cerevisiaeDNA-damage tolerancegenome instabilitymethyl methanesulfonateyeast

Identifiers

PMID30301740
PMCPMC6283154
OpenAlexW2897238713

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.