Evidence map›Paper›PMID 30298236›Full record

ArticleParasitology research2018

Is the genetic variability of Cathepsin B important in the pathogenesis of Blastocystis spp.?

Nelly Raquel Gonzalez-Arenas, Guiehdani Villalobos, Gie Bele Vargas-Sanchez, Christian Alberto Avalos-Galarza, Laura Margarita Marquez-Valdelamar, Maria Elena Ramirez-Miranda, Angelica Olivo-Diaz, Mirza Romero-Valdovinos, Fernando Martinez-Hernandez, Pablo Maravilla

Abstract read
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In one paragraph

Article in Parasitology research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. The hidden impact of differentJournal of parasitic diseases : official organ of the Indian Society for Parasitology · 2019
    Article
  6. Anti-International journal of environmental research and public health · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Nelly Raquel Gonzalez-ArenasHospital General "Dr. Manuel Gea Gonzalez", Calzada de Tlalpan 4800, Del. Tlalpan, 14080, Mexico City, Mexico.
Guiehdani VillalobosDepartamento de Ecología Evolutiva, Instituto de Ecologia, Universidad Nacional Autonoma de Mexico, Ciudad Universitaria, 04510, Mexico City, Mexico.
Gie Bele Vargas-SanchezHospital General "Dr. Manuel Gea Gonzalez", Calzada de Tlalpan 4800, Del. Tlalpan, 14080, Mexico City, Mexico.
Christian Alberto Avalos-GalarzaHospital General "Dr. Manuel Gea Gonzalez", Calzada de Tlalpan 4800, Del. Tlalpan, 14080, Mexico City, Mexico.
Laura Margarita Marquez-ValdelamarDepartamento de Secuenciacion, Instituto de Biologia, Universidad Nacional Autonoma de Mexico, Ciudad Universitaria, 04510, Mexico City, Mexico.
Maria Elena Ramirez-MirandaHospital General "Dr. Manuel Gea Gonzalez", Calzada de Tlalpan 4800, Del. Tlalpan, 14080, Mexico City, Mexico.
Angelica Olivo-DiazHospital General "Dr. Manuel Gea Gonzalez", Calzada de Tlalpan 4800, Del. Tlalpan, 14080, Mexico City, Mexico.
Mirza Romero-ValdovinosHospital General "Dr. Manuel Gea Gonzalez", Calzada de Tlalpan 4800, Del. Tlalpan, 14080, Mexico City, Mexico.
Fernando Martinez-HernandezHospital General "Dr. Manuel Gea Gonzalez", Calzada de Tlalpan 4800, Del. Tlalpan, 14080, Mexico City, Mexico. fherxyz@yahoo.com.
Pablo MaravillaHospital General "Dr. Manuel Gea Gonzalez", Calzada de Tlalpan 4800, Del. Tlalpan, 14080, Mexico City, Mexico. maravillap@yahoo.com.ORCID http://orcid.org/0000-0003-2534-9447
Hospital General Dr. Manuel Gea Gonzalez · MXInstituto de Ecología · MXUniversidad Nacional Autónoma de México · MX

Funding

Consejo Nacional de Ciencia y Tecnología 220301 and 25263 (CB-2011/168619)Consejo Nacional de Ciencia y Tecnología CB-2011/168619
6 · The paper itself

Abstract

The potential role of Blastocystis as a pathogen is controversial because it is found in both symptomatic and asymptomatic carriers. Since Cathepsin B has been identified as a main virulence factor that contributes to the pathogenesis of this parasite, the purpose of this study was to analyze the genetic polymorphisms of cathepsin B from Blastocystis from patients with irritable bowel syndrome and from asymptomatic carriers. DNA from fecal samples of both groups, which were previously genotyped by 18S sequencing, was used to amplify a fragment of the cathepsin B gene. Phylogenetic reconstructions were performed and some genetic population indexes were obtained. Amplicons of 27 samples (15 cases, 10 controls, and two commercial ATCC strains) were obtained and analyzed. Phylogenetic reconstructions using nucleotides or inferred amino acid sequences did not separate between cases or controls or among subtypes. Regarding the values of genetic variability, we found that the haplotype and nucleotide diversity indexes of cathepsin B from cases and controls were similar to the values of 18S from controls. By contrast, 18S from cases showed low variability, suggesting that the genetic variability of cathepsin B was not related to the symptomatology of Blastocystis carriers. However, since no polymorphisms related to cases or controls were found, it is logical to assume that the potential damage caused by Blastocystis in situ may be due to unclear mechanisms of Cathepsin B regulation and expression that should be studied in future studies.

Indexed as

AdultAmino Acid SequenceBlastocystisBlastocystis InfectionsCathepsin BFecesFemaleGenetics, PopulationGenotypeHaplotypesHumansIrritable Bowel SyndromeMaleMiddle AgedPhylogenyPolymorphism, GeneticCathepsin BVirulence FactorsBlastocystis spp.cathepsin BGenetic polymorphismIrritable bowel syndromePathogenesisSubtypes

Identifiers

PMID30298236
OpenAlexW2894980163

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.