Evidence map›Paper›PMID 30297915›Full record

ArticleScientific reports2018

Multiple intrasyntenic rearrangements and rapid speciation in voles.

Svetlana A Romanenko, Natalya A Serdyukova, Polina L Perelman, Vladimir A Trifonov, Feodor N Golenishchev, Nina Sh Bulatova, Roscoe Stanyon, Alexander S Graphodatsky

Abstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Svetlana A RomanenkoInstitute of Molecular and Cellular Biology, SB RAS, Novosibirsk, Russia. rosa@mcb.nsc.ru.ORCID http://orcid.org/0000-0002-0951-5209
Natalya A SerdyukovaInstitute of Molecular and Cellular Biology, SB RAS, Novosibirsk, Russia.
Polina L PerelmanInstitute of Molecular and Cellular Biology, SB RAS, Novosibirsk, Russia.
Vladimir A TrifonovInstitute of Molecular and Cellular Biology, SB RAS, Novosibirsk, Russia.
Feodor N GolenishchevZoological Institute, RAS, Saint-Petersburg, Russia.
Nina Sh BulatovaA.N. Severtsov Institute of Ecology and Evolution, RAS, Moscow, Russia.
Roscoe StanyonDepartment of Biology, Anthropology Laboratories, University of Florence, Florence, Italy.ORCID http://orcid.org/0000-0002-7229-1092
Alexander S GraphodatskyInstitute of Molecular and Cellular Biology, SB RAS, Novosibirsk, Russia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Remarkably stable genomic chromosome elements (evolutionary conserved segments or syntenies) are the basis of large-scale chromosome architecture in vertebrate species. However, these syntenic elements harbour evolutionary important changes through intrachromosomal rearrangements such as inversions and centromere repositioning. Here, using FISH with a set of 20 region-specific probes on a wide array of 28 species, we analyzed evolution of three conserved syntenic regions of the Arvicolinae ancestral karyotype. Inside these syntenies we uncovered multiple, previously cryptic intrachromosomal rearrangements. Although in each of the three conserved blocks we found inversions and centromere repositions, the blocks experienced different types of rearrangements. In two syntenies centromere repositioning predominated, while in the third region, paracentric inversions were more frequent, whereas pericentric inversions were not detected. We found that some of the intrachromosomal rearrangements, mainly paracentric inversions, were synapomorphic for whole arvicoline genera or tribes: genera Alexandromys and Microtus, tribes Ellobini and Myodini. We hypothesize that intrachromosomal rearrangements within conserved syntenic blocks are a major evolutionary force modulating genome architecture in species-rich and rapidly-evolving rodent taxa. Inversions and centromere repositioning may impact speciation and provide a potential link between genome evolution, speciation, and biogeography.

Indexed as

Genetic SpeciationAnimalsArvicolinaeChromosome PaintingChromosomes, MammalianEvolution, MolecularGene RearrangementPhylogenySynteny

Identifiers

PMID30297915
PMCPMC6175948

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.