Evidence map›Paper›PMID 30297841›Full record

ArticleScientific reports2018

Tuneable poration: host defense peptides as sequence probes for antimicrobial mechanisms.

Marc-Philipp Pfeil, Alice L B Pyne, Valeria Losasso, Jascindra Ravi, Baptiste Lamarre, Nilofar Faruqui, Hasan Alkassem, Katharine Hammond, Peter J Judge, Martyn Winn and 5 more

Erratum issuedAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Probing theRSC chemical biology · 2026
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors.

Marc-Philipp PfeilNational Physical Laboratory, Hampton Road, Teddington, TW11 0LW, UK.
Alice L B PyneLondon Centre for Nanotechnology, University College London, London, WC1H 0AH, UK.ORCID http://orcid.org/0000-0002-2658-8987
Valeria LosassoSTFC Daresbury Laboratory, Daresbury, Warrington, WA4 4AD, UK.
Jascindra RaviNational Physical Laboratory, Hampton Road, Teddington, TW11 0LW, UK.
Baptiste LamarreNational Physical Laboratory, Hampton Road, Teddington, TW11 0LW, UK.
Nilofar FaruquiNational Physical Laboratory, Hampton Road, Teddington, TW11 0LW, UK.
Hasan AlkassemNational Physical Laboratory, Hampton Road, Teddington, TW11 0LW, UK.
Katharine HammondNational Physical Laboratory, Hampton Road, Teddington, TW11 0LW, UK.
Peter J JudgeDepartment of Biochemistry, University of Oxford, Oxford, OX1 3QU, UK.
Martyn WinnSTFC Daresbury Laboratory, Daresbury, Warrington, WA4 4AD, UK.ORCID http://orcid.org/0000-0003-0496-6796
Glenn J MartynaIBM Research, Yorktown Heights, NY, 10598, USA.ORCID http://orcid.org/0000-0002-8969-2298
Jason CrainIBM Research, Yorktown Heights, NY, 10598, USA.
Anthony WattsDepartment of Biochemistry, University of Oxford, Oxford, OX1 3QU, UK.
Bart W HoogenboomLondon Centre for Nanotechnology, University College London, London, WC1H 0AH, UK.
Maxim G RyadnovNational Physical Laboratory, Hampton Road, Teddington, TW11 0LW, UK. max.ryadnov@npl.co.uk.

Funding

Medical Research Council MR/R024871/1
6 · The paper itself

Abstract

The spread of antimicrobial resistance stimulates discovery strategies that place emphasis on mechanisms circumventing the drawbacks of traditional antibiotics and on agents that hit multiple targets. Host defense peptides (HDPs) are promising candidates in this regard. Here we demonstrate that a given HDP sequence intrinsically encodes for tuneable mechanisms of membrane disruption. Using an archetypal HDP (cecropin B) we show that subtle structural alterations convert antimicrobial mechanisms from native carpet-like scenarios to poration and non-porating membrane exfoliation. Such distinct mechanisms, studied using low- and high-resolution spectroscopy, nanoscale imaging and molecular dynamics simulations, all maintain strong antimicrobial effects, albeit with diminished activity against pathogens resistant to HDPs. The strategy offers an effective search paradigm for the sequence probing of discrete antimicrobial mechanisms within a single HDP.

Indexed as

Amino Acid SequenceAnimalsAnti-Bacterial AgentsBacteriaBacterial InfectionsDrug DiscoveryDrug Resistance, BacterialHumansInsect ProteinsLipid BilayersModels, MolecularMothsPhospholipidsAnti-Bacterial Agentscecropin B protein, InsectaInsect ProteinsLipid BilayersPhospholipids

Identifiers

PMID30297841
PMCPMC6175903

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.