Evidence map›Paper›PMID 30296244›Full record

ArticleIEEE journal of biomedical and health informatics2019

Mining Directional Drug Interaction Effects on Myopathy Using the FAERS Database.

Danai Chasioti, Xiaohui Yao, Pengyue Zhang, Samuel Lerner, Sara K Quinney, Xia Ning, Lang Li, Li Shen

Open access · greenAbstract read
In one paragraph

Article in IEEE journal of biomedical and health informatics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
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  4. Detecting Drug-Drug Interactions in COVID-19 Patients.Studies in health technology and informatics · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Danai Chasioti
Xiaohui Yao
Pengyue Zhang
Samuel Lerner
Sara K Quinney
Xia Ning
Lang Li
Li Shen
The Ohio State University · USIndiana University – Purdue University Indianapolis · USUniversity of Pennsylvania · US

Funding

Clinical Importance of Drug-Drug InteractionsR01AG025152 · NIA · UNIVERSITY OF PENNSYLVANIA · PI HENNESSY, SEAN, LI, LANG · 2006 to 2021
$8.1M
A Translational Bioinformatics Approach in the Drug Interaction ResearchR01GM104483 · NIGMS · OHIO STATE UNIVERSITY · PI LI, LANG · 2014 to 2017
$1.5M
Integrated bioinformatic and pharmacokinetic models of high-dimensional drug interactionsR01GM117206 · NIGMS · INDIANA UNIVERSITY INDIANAPOLIS · PI QUINNEY, SARA K · 2016 to 2018
$1.1M
NIA NIH HHS R01 AG025152NIGMS NIH HHS R01 GM104483NIGMS NIH HHS R01 GM117206
6 · The paper itself

Abstract

Mining high-order drug-drug interaction (DDI) induced adverse drug effects from electronic health record databases is an emerging area, and very few studies have explored the relationships between high-order drug combinations. We investigate a novel pharmacovigilance problem for mining directional DDI effects on myopathy using the FDA Adverse Event Reporting System (FAERS) database. Our paper provides information on the risk of myopathy associated with adding new drugs on the already prescribed medication, and visualizes the identified directional DDI patterns as user-friendly graphical representation. We utilize the Apriori algorithm to extract frequent drug combinations from the FAERS database. We use odds ratio to estimate the risk of myopathy associated with directional DDI. We create a tree-structured graph to visualize the findings for easy interpretation. Our method confirmed myopathy association with previously reported HMG-CoA reductase inhibitors like rosuvastatin, fluvastatin, simvastatin, and atorvastatin. New, previously unidentified but mechanistically plausible associations with myopathy were also observed, such as the DDI between pamidronate and levofloxacin. Additional top findings are gadolinium-based imaging agents, which however are often used in myopathy diagnosis. Other DDIs with no obvious mechanism are also reported, such as that of sulfamethoxazole with trimethoprim and potassium chloride. This study shows the feasibility to estimate high-order directional DDIs in a fast and accurate manner. The results of the analysis could become a useful tool in the specialists' hands through an easy-to-understand graphic visualization.

Indexed as

Adverse Drug Reaction Reporting SystemsDrug InteractionsAlgorithmsComputational BiologyDatabases, PharmaceuticalData MiningDrug-Related Side Effects and Adverse ReactionsHumans

Identifiers

PMID30296244
PMCPMC6745690
OpenAlexW2897869212

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.