Evidence map›Paper›PMID 30295650›Full record

ArticleJournal of visualized experiments : JoVE2018

CRISPR/Cas9 Gene Editing to Make Conditional Mutants of Human Malaria Parasite P. falciparum.

Heather M Kudyba, David W Cobb, Anat Florentin, Michelle Krakowiak, Vasant Muralidharan

Open access · greenAbstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 17 citations in OpenAlex.

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  8. bioRxiv : the preprint server for biology · 2024
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  15. Plastid biogenesis in malaria parasites requires the interactions and catalytic activity of the Clp proteolytic system.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Heather M KudybaDepartment of Cellular Biology, University of Georgia; Center for Tropical and Emerging Global Diseases, University of Georgia.
David W CobbDepartment of Cellular Biology, University of Georgia.
Anat FlorentinDepartment of Cellular Biology, University of Georgia; Center for Tropical and Emerging Global Diseases, University of Georgia.
Michelle KrakowiakDepartment of Cellular Biology, University of Georgia.
Vasant MuralidharanDepartment of Cellular Biology, University of Georgia; Center for Tropical and Emerging Global Diseases, University of Georgia; vasant@uga.edu.
University of Georgia · US

Funding

Training in Tropical and Emerging Global Diseases - SupplementT32AI060546 · NIAID · UNIVERSITY OF GEORGIA (UGA) · PI Silvia N Moreno, Vasant Muralidharan · 2004 to 2026
$5.1M
Elucidating the trafficking mechanisms of effector proteins to the Plasmodium infected red blood cellR01AI130139 · NIAID · UNIVERSITY OF GEORGIA · PI MURALIDHARAN, VASANT · 2018 to 2022
$2.1M
ROLE OF CHAPERONES IN MAINTAINING THE ASPARAGINE REPEAT-RICH PROTEOME OF P. FALCIR00AI099156 · NIAID · UNIVERSITY OF GEORGIA · PI MURALIDHARAN, VASANT · 2013 to 2014
$498k
NIAID NIH HHS R00 AI099156NIAID NIH HHS R01 AI130139NIAID NIH HHS T32 AI060546
6 · The paper itself

Abstract

Malaria is a significant cause of morbidity and mortality worldwide. This disease, which primarily affects those living in tropical and subtropical regions, is caused by infection with Plasmodium parasites. The development of more effective drugs to combat malaria can be accelerated by improving our understanding of the biology of this complex parasite. Genetic manipulation of these parasites is key to understanding their biology; however, historically the genome of P. falciparum has been difficult to manipulate. Recently, CRISPR/Cas9 genome editing has been utilized in malaria parasites, allowing for easier protein tagging, generation of conditional protein knockdowns, and deletion of genes. CRISPR/Cas9 genome editing has proven to be a powerful tool for advancing the field of malaria research. Here, we describe a CRISPR/Cas9 method for generating glmS-based conditional knockdown mutants in P. falciparum. This method is highly adaptable to other types of genetic manipulations, including protein tagging and gene knockouts.

Indexed as

AnimalsCRISPR-Cas SystemsGene EditingHumansMalaria, FalciparumParasites

Identifiers

PMID30295650
PMCPMC6235188
OpenAlexW2891174884

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.