Evidence map›Paper›PMID 30293965›Full record

ArticleBiochimica et biophysica acta. Biomembranes2018

The importance of the membrane interface as the reference state for membrane protein stability.

Jakob P Ulmschneider, Jeremy C Smith, Stephen H White, Martin B Ulmschneider

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta. Biomembranes, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. PEO-Biomacromolecules · 2022
    Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Local Bilayer Hydrophobicity Modulates Membrane Protein Stability.Journal of the American Chemical Society · 2021
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 4 institutions in 4 countries.

Jakob P UlmschneiderSchool of Physics and Astronomy and the Institute of Natural Sciences, Shanghai Jiao Tong University, Shanghai, China. Electronic address: jakob@sjtu.edu.cn.
Jeremy C SmithCenter for Molecular Biophysics, Oak Ridge National Laboratory, Oak Ridge, TN, USA; Department of Biochemistry & Cellular Molecular Biology, University of Tennessee, Knoxville, TN, USA.
Stephen H WhiteDepartment of Physiology & Biophysics, University of California at Irvine, Irvine, CA, USA.
Martin B UlmschneiderDepartment of Chemistry, King's College London, UK. Electronic address: martin@ulmschneider.com.
King's College London · GBOak Ridge National Laboratory · USShanghai Jiao Tong University · CNUniversity of California, Irvine · US

Funding

Membrane Protein Folding and AssemblyR01GM074637 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI WHITE, STEPHEN H. · 2006 to 2020
$4.5M
NIGMS NIH HHS R01 GM074637
6 · The paper itself

Abstract

The insertion of nascent polypeptide chains into lipid bilayer membranes and the stability of membrane proteins crucially depend on the equilibrium partitioning of polypeptides. For this, the transfer of full sequences of amino-acid residues into the bilayer, rather than individual amino acids, must be understood. Earlier studies have revealed that the most likely reference state for partitioning very hydrophobic sequences is the membrane interface. We have used μs-scale simulations to calculate the interface-to-transmembrane partitioning free energies ΔG

Indexed as

Protein StabilityAmino AcidsHydrophobic and Hydrophilic InteractionsLipid BilayersMembrane ProteinsMembranesMolecular Dynamics SimulationPeptidesProtein Structure, SecondaryThermodynamicsAmino AcidsLipid BilayersMembrane ProteinsPeptidesMembraneMolecular dynamicsPeptide partitioningTransfer free energyTranslocon

Identifiers

PMID30293965
PMCPMC6309459
OpenAlexW2890040492

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.