Evidence map›Paper›PMID 30292635›Full record

ArticleBiochimica et biophysica acta. Molecular basis of disease2018

Differential expression of tumor-associated genes and altered gut microbiome with decreased Akkermansia muciniphila confer a tumor-preventive microenvironment in intestinal epithelial Pten-deficient mice.

Cody Howe, Su Jin Kim, Jonathon Mitchell, Eunok Im, Yong Sung Kim, You Sun Kim, Sang Hoon Rhee

Abstract read
In one paragraph

Article in Biochimica et biophysica acta. Molecular basis of disease, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 37 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Review
  5. Virulence · 2024
    Review
  6. Review
  7. Article
  8. Frontiers in immunology · 2023
    Article
  9. Review
  10. Journal of Cancer · 2022
    Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Increase inInternational journal of molecular sciences · 2021
    Article
  16. Article
  17. The Interaction Between the Microbiome and Tumors.Frontiers in cellular and infection microbiology · 2021
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Cody HoweDepartment of Biological Sciences, Oakland University, Rochester, MI 48309, USA.
Su Jin KimCollege of Pharmacy, Pusan National University, Busan, Republic of Korea.
Jonathon MitchellDepartment of Biological Sciences, Oakland University, Rochester, MI 48309, USA.
Eunok ImCollege of Pharmacy, Pusan National University, Busan, Republic of Korea; Division of Digestive Diseases, David Geffen School of Medicine, University of California, Los Angeles, CA 90095, USA.
Yong Sung KimGastroenterology, Wonkwang University Sanbon Hospital, Wonkwang Digestive Disease Research Institute, Gunpo, Gyeonggi-do 435-040, Republic of Korea.
You Sun KimDepartment of Internal Medicine, Seoul Paik Hospital, Inje University College of Medicine, Seoul 100-032, Republic of Korea.
Sang Hoon RheeDepartment of Biological Sciences, Oakland University, Rochester, MI 48309, USA. Electronic address: srhee@oakland.edu.
Oakland University · USInje University Seoul Paik Hospital · KRPusan National University · KRUniversity of California, Los Angeles · US

Funding

Innate Immune Response and Intestinal InflammationK01DK079015 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI RHEE, SANG HOON · 2008 to 2010
$450k
NIDDK NIH HHS K01 DK079015
6 · The paper itself

Abstract

Phosphatase and tensin homolog (Pten) antagonizes PI3K-Akt signaling; therefore, Pten impairment causes tumorigenesis. However, the correlation between Pten deficiency and colon cancer has remained elusive due to numerous opposite observations. To study this correlation, we examined whether Pten deficiency in intestinal epithelial cells (IECs) induces tumorigenesis. With mucosal biopsies of human colon cancer and normal colon, Pten mRNA was evaluated by quantitative PCR. Using IEC-specific Pten knockout mice (Pten

Indexed as

Gastrointestinal MicrobiomeGene Expression Regulation, NeoplasticAdultAgedAged, 80 and overAnimalsCarcinogenesisColonic NeoplasmsHumansIntestinal NeoplasmsMiceMice, Inbred C57BLMice, KnockoutMiddle AgedPTEN PhosphohydrolaseVerrucomicrobiaPTEN PhosphohydrolasePTEN protein, humanPten protein, mouseMicrobiomePtenToll-like receptorTumor microenvironmentTumor prevention

Identifiers

PMID30292635
PMCPMC6239937
OpenAlexW2895491613

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.