Evidence map›Paper›PMID 30292300›Full record

ArticleAnalytica chimica acta2018

Exosomal lipids for classifying early and late stage non-small cell lung cancer.

Teresa W M Fan, Xiaofei Zhang, Chi Wang, Ye Yang, Woo-Young Kang, Susanne Arnold, Richard M Higashi, Jinze Liu, Andrew N Lane

Open access · greenAbstract read
In one paragraph

Article in Analytica chimica acta, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed
5.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 112 citations in OpenAlex.

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  11. Relationship between exosomes and cancer: formation, diagnosis, and treatment.International journal of biological sciences · 2025
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3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Teresa W M FanCenter for Environmental and Systems Biochemistry (CESB), Markey Cancer Center, Department of Toxicology and Cancer Biology, University of Kentucky, United States. Electronic address: twmfan@gmail.com.
Xiaofei ZhangDepartment of Computer Science and Markey Cancer Center, University of Kentucky, United States.
Chi WangDepartment of Biostatistics and Markey Cancer Center, University of Kentucky, United States.
Ye YangCenter for Environmental and Systems Biochemistry (CESB), Markey Cancer Center, Department of Toxicology and Cancer Biology, University of Kentucky, United States.
Woo-Young KangCenter for Environmental and Systems Biochemistry (CESB), Markey Cancer Center, Department of Toxicology and Cancer Biology, University of Kentucky, United States.
Susanne ArnoldMarkey Cancer Center, University of Kentucky, United States.
Richard M HigashiCenter for Environmental and Systems Biochemistry (CESB), Markey Cancer Center, Department of Toxicology and Cancer Biology, University of Kentucky, United States.
Jinze LiuDepartment of Computer Science and Markey Cancer Center, University of Kentucky, United States.
Andrew N LaneCenter for Environmental and Systems Biochemistry (CESB), Markey Cancer Center, Department of Toxicology and Cancer Biology, University of Kentucky, United States. Electronic address: andrew.lane@uky.edu.
University of Kentucky · US

Funding

University of Kentucky Markey Cancer Center Support Grant ECIA SupplementP30CA177558 · NCI · UNIVERSITY OF KENTUCKY · PI KATHLEEN L. O'CONNOR · 2013 to 2026
$38.3M
SAMPLE COREU24DK097215 · NIDDK · UNIVERSITY OF KENTUCKY · PI FAN, TERESA WHEI-MEI, HIGASHI, RICHARD M · 2013 to 2017
$8.7M
Systems Biochemistry in Lung Cancer: Toward a Mechanistic Understanding of NSCLCP01CA163223 · NCI · UNIVERSITY OF LOUISVILLE · PI FAN, TERESA WHEI-MEI, FAN, TERESA WHEI-MEI · 2013 to 2017
$6.5M
Algorithms for Accurate and Scalable Identification of Isotopologues from Mass Spectrometry DataR03CA222449 · NCI · UNIVERSITY OF KENTUCKY · PI HIGASHI, RICHARD M, LIU, JINZE · 2017 to 2017
$153k
NCI NIH HHS P01 CA163223NCI NIH HHS P30 CA177558NCI NIH HHS R03 CA222449NIDDK NIH HHS U24 DK097215
6 · The paper itself

Abstract

Lung cancer is the leading cause of cancer deaths in the United States. Patients with early stage lung cancer have the best prognosis with surgical removal of the tumor, but the disease is often asymptomatic until advanced disease develops, and there are no effective blood-based screening methods for early detection of lung cancer in at-risk populations. We have explored the lipid profiles of blood plasma exosomes using ultra high-resolution Fourier transform mass spectrometry (UHR-FTMS) for early detection of the prevalent non-small cell lung cancers (NSCLC). Exosomes are nanovehicles released by various cells and tumor tissues to elicit important biofunctions such as immune modulation and tumor development. Plasma exosomal lipid profiles were acquired from 39 normal and 91 NSCLC subjects (44 early stage and 47 late stage). We have applied two multivariate statistical methods, Random Forest (RF) and Least Absolute Shrinkage and Selection Operator (LASSO) to classify the data. For the RF method, the Gini importance of the assigned lipids was calculated to select 16 lipids with top importance. Using the LASSO method, 7 features were selected based on a grouped LASSO penalty. The Area Under the Receiver Operating Characteristic curve for early and late stage cancer versus normal subjects using the selected lipid features was 0.85 and 0.88 for RF and 0.79 and 0.77 for LASSO, respectively. These results show the value of RF and LASSO for metabolomics data-based biomarker development, which provide robust an independent classifiers with sparse data sets. Application of LASSO and Random Forests identifies lipid features that successfully distinguish early stage lung cancer patient from healthy individuals.

Indexed as

AdultAgedAged, 80 and overCarcinoma, Non-Small-Cell LungExosomesFemaleHumansLipidsLung NeoplasmsMaleMass SpectrometryMiddle AgedMultivariate AnalysisNeoplasm StagingLipidsExosomal lipid profilingLASSONon-small cell lung cancerRandom forestUltrahigh resolution Fourier transform mass spectrometry

Identifiers

PMID30292300
PMCPMC6582997
OpenAlexW2792364195

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.