Evidence map›Paper›PMID 30291814›Full record

ArticleIUBMB life2018

Massive mitochondrial DNA content in diplonemid and kinetoplastid protists.

Julius Lukeš, Richard Wheeler, Dagmar Jirsová, Vojtěch David, John M Archibald

Open access · hybridAbstract read
In one paragraph

Article in IUBMB life, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 57 citations in OpenAlex.

  1. Preparation of Diplonemid Samples for Microscopy.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Detection ofPathogens (Basel, Switzerland) · 2022
    Article
  14. Article
  15. Article
  16. Article
  17. Mitochondrial RNA editing inComputational and structural biotechnology journal · 2022
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 3 countries.

Julius LukešInstitute of Parasitology, Biology Centre, Czech Academy of Sciences, České Budějovice (Budweis), Czech Republic.ORCID 0000-0002-0578-6618
Richard WheelerSir William Dunn School of Pathology, University of Oxford, Oxford, UK.
Dagmar JirsováInstitute of Parasitology, Biology Centre, Czech Academy of Sciences, České Budějovice (Budweis), Czech Republic.
Vojtěch DavidDepartment of Biochemistry and Molecular Biology, Dalhousie University, Halifax, Canada.
John M ArchibaldDepartment of Biochemistry and Molecular Biology, Dalhousie University, Halifax, Canada.
Dalhousie University · CAInstitute of Parasitology · CZUniversity of Oxford · GBUniversity of South Bohemia in České Budějovice · CZ

Funding

CIHR MOP-115141Wellcome TrustWellcome Trust 103261/Z/13/Z
6 · The paper itself

Abstract

The mitochondrial DNA of diplonemid and kinetoplastid protists is known for its suite of bizarre features, including the presence of concatenated circular molecules, extensive trans-splicing and various forms of RNA editing. Here we report on the existence of another remarkable characteristic: hyper-inflated DNA content. We estimated the total amount of mitochondrial DNA in four kinetoplastid species (Trypanosoma brucei, Trypanoplasma borreli, Cryptobia helicis, and Perkinsela sp.) and the diplonemid Diplonema papillatum. Staining with 4',6-diamidino-2-phenylindole and RedDot1 followed by color deconvolution and quantification revealed massive inflation in the total amount of DNA in their organelles. This was further confirmed by electron microscopy. The most extreme case is the ∼260 Mbp of DNA in the mitochondrion of Diplonema, which greatly exceeds that in its nucleus; this is, to our knowledge, the largest amount of DNA described in any organelle. Perkinsela sp. has a total mitochondrial DNA content ~6.6× greater than its nuclear genome. This mass of DNA occupies most of the volume of the Perkinsela cell, despite the fact that it contains only six protein-coding genes. Why so much DNA? We propose that these bloated mitochondrial DNAs accumulated by a ratchet-like process. Despite their excessive nature, the synthesis and maintenance of these mtDNAs must incur a relatively low cost, considering that diplonemids are one of the most ubiquitous and speciose protist groups in the ocean. © 2018 IUBMB Life, 70(12):1267-1274, 2018.

Indexed as

DNA, MitochondrialEuglenozoaKinetoplastidaMitochondriaPhylogenyTrans-SplicingDNA, MitochondrialDNA contentkinetoplast DNAmitochondrial DNAprotist

Identifiers

PMID30291814
PMCPMC6334171
OpenAlexW2895072525

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.