Evidence map›Paper›PMID 30291277›Full record

ArticleScientific reports2018

Mathematical Modeling and Analyses of Interspike-Intervals of Spontaneous Activity in Afferent Neurons of the Zebrafish Lateral Line.

Sangmin Song, Ji Ah Lee, Ilya Kiselev, Varun Iyengar, Josef G Trapani, Nessy Tania

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Variability and Randomness of the Instantaneous Firing Rate.Frontiers in computational neuroscience · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Sangmin SongDepartment of Biology and Neuroscience Program, Amherst College, Amherst, MA, 01002, USA.
Ji Ah LeeDepartment of Mathematics and Statistics, Smith College, Northampton, MA, 01063, USA.
Ilya KiselevDepartment of Biology and Neuroscience Program, Amherst College, Amherst, MA, 01002, USA.
Varun IyengarDepartment of Biology and Neuroscience Program, Amherst College, Amherst, MA, 01002, USA.
Josef G TrapaniDepartment of Biology and Neuroscience Program, Amherst College, Amherst, MA, 01002, USA.ORCID http://orcid.org/0000-0002-6898-649X
Nessy TaniaDepartment of Mathematics and Statistics, Smith College, Northampton, MA, 01063, USA. ntania@smith.edu.ORCID http://orcid.org/0000-0003-4256-2434
Amherst College · USSmith College · US

Funding

Sensory Encoding in Hair Cells of the Zebrafish Lateral LineR15DC014843 · NIDCD · AMHERST COLLEGE · PI TRAPANI, JOSEF GEORGE · 2016 to 2016
$439k
National Science Foundation (NSF) NSF UBM-1129194NIDCD NIH HHS R15 DC014843Simons Foundation 355461U.S. Department of Health & Human Services | NIH | National Institute on Deafness and Other Communication Disorders (NIDCD) NIH R15DC014843
6 · The paper itself

Abstract

Without stimuli, hair cells spontaneously release neurotransmitter leading to spontaneous generation of action potentials (spikes) in innervating afferent neurons. We analyzed spontaneous spike patterns recorded from the lateral line of zebrafish and found that distributions of interspike intervals (ISIs) either have an exponential shape or an "L" shape that is characterized by a sharp decay but wide tail. ISI data were fitted to renewal-process models that accounted for the neuron refractory periods and hair-cell synaptic release. Modeling the timing of synaptic release using a mixture of two exponential distributions yielded the best fit for our ISI data. Additionally, lateral line ISIs displayed positive serial correlation and appeared to exhibit switching between faster and slower modes of spike generation. This pattern contrasts with previous findings from the auditory system where ISIs tended to have negative serial correlation due to synaptic depletion. We propose that afferent neuron innervation with multiple and heterogenous hair-cells synapses, each influenced by changes in calcium domains, can serve as a mechanism for the random switching behavior. Overall, our analyses provide evidence of how physiological similarities and differences between synapses and innervation patterns in the auditory, vestibular, and lateral line systems can lead to variations in spontaneous activity.

Indexed as

Action PotentialsAnimalsLateral Line SystemModels, NeurologicalNeurons, AfferentSynapsesZebrafish

Identifiers

PMID30291277
PMCPMC6173758
OpenAlexW2895477751

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.