Evidence map›Paper›PMID 30291231›Full record

ArticleNature communications2018

Self-induced mechanical stress can trigger biofilm formation in uropathogenic Escherichia coli.

Eric K Chu, Onur Kilic, Hojung Cho, Alex Groisman, Andre Levchenko

Abstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed.

  1. Article
  2. Mechanics of compression-driven morphogenesis.Development (Cambridge, England) · 2026
    Review
  3. Article
  4. Review
  5. AreVirulence · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. A Hamilton principle-based model for diffusion-driven biofilm growth.Biomechanics and modeling in mechanobiology · 2024
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Eric K ChuDepartment of Biomedical Engineering, Yale University, New Haven, CT, 06520, USA.
Onur KilicDepartment of Biomedical Engineering, The Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA.ORCID http://orcid.org/0000-0002-7902-5539
Hojung ChoDepartment of Biomedical Engineering, The Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA.
Alex GroismanDepartment of Physics, University of California, San Diego, La Jolla, CA, 92093, USA.
Andre LevchenkoDepartment of Biomedical Engineering, Yale University, New Haven, CT, 06520, USA. andre.levchenko@yale.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial biofilms represent an important medical problem; however, the mechanisms of the onset of biofilm formation are poorly understood. Here, using new controlled methods allowing high-throughput and reproducible biofilm growth, we show that biofilm formation is linked to self-imposed mechanical stress. In growing uropathogenic Escherichia coli colonies, we report that mechanical stress can initially emerge from the physical stress accompanying colony confinement within micro-cavities or hydrogel environments reminiscent of the cytosol of host cells. Biofilm formation can then be enhanced by a nutrient access-modulated feedback loop, in which biofilm matrix deposition can be particularly high in areas of increased mechanical and biological stress, with the deposited matrix further enhancing the stress levels. This feedback regulation can lead to adaptive and diverse biofilm formation guided by the environmental stresses. Our results suggest previously unappreciated mechanisms of the onset and progression of biofilm growth.

Indexed as

Anti-Bacterial AgentsBiofilmsCell ProliferationDrug TolerancePressureStress, MechanicalUropathogenic Escherichia coliAnti-Bacterial Agents

Identifiers

PMID30291231
PMCPMC6173693

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.