Evidence map›Paper›PMID 30289910›Full record

ArticlePloS one2018

Overexpression of the Sorghum bicolor SbCCoAOMT alters cell wall associated hydroxycinnamoyl groups.

Hannah M Tetreault, Erin D Scully, Tammy Gries, Nathan A Palmer, Deanna L Funnell-Harris, Lisa Baird, Javier Seravalli, Bruce S Dien, Gautam Sarath, Thomas E Clemente and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 38 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Hannah M TetreaultWheat, Sorghum and Forage Research Unit, USDA-ARS, Lincoln, Nebraska, United States of America.ORCID 0000-0001-5911-7316
Erin D ScullyWheat, Sorghum and Forage Research Unit, USDA-ARS, Lincoln, Nebraska, United States of America.
Tammy GriesWheat, Sorghum and Forage Research Unit, USDA-ARS, Lincoln, Nebraska, United States of America.
Nathan A PalmerWheat, Sorghum and Forage Research Unit, USDA-ARS, Lincoln, Nebraska, United States of America.
Deanna L Funnell-HarrisWheat, Sorghum and Forage Research Unit, USDA-ARS, Lincoln, Nebraska, United States of America.
Lisa BairdDepartment of Biology, Shiley Center for Science and Technology, University of San Diego, San Diego, California, United States of America.
Javier SeravalliRedox Biology Center and Department of Biochemistry, University of Nebraska-Lincoln, Lincoln, Nebraska, United States of America.
Bruce S DienNational Center for Agricultural Utilization Research, USDA-ARS, Peoria, Illinois, United States of America.
Gautam SarathWheat, Sorghum and Forage Research Unit, USDA-ARS, Lincoln, Nebraska, United States of America.
Thomas E ClementeDepartment of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, Nebraska, United States of America.
Scott E SattlerWheat, Sorghum and Forage Research Unit, USDA-ARS, Lincoln, Nebraska, United States of America.
University of Nebraska–Lincoln · USNational Center for Agricultural Utilization Research · USUniversity of San Diego · US

Funding

UNMC Structural Biology CoreP20GM103427 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI Heather Colleen Jensen-Smith · 2012 to 2026
$59.2M
UNMC/EPPLEY CANCER CENTER SUPPORT GRANTP30CA036727 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI Apar Kishor Ganti · 1985 to 2026
$55.0M
UNMC Histology/Imaging and Creighton University Imaging Core FacilityP30GM110768 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI SMITH, SHELLEY D · 2014 to 2018
$5.1M
NCI NIH HHS P30 CA036727NIGMS NIH HHS P20 GM103427NIGMS NIH HHS P30 GM110768
6 · The paper itself

Abstract

Sorghum (Sorghum bicolor) is a drought tolerant crop, which is being developed as a bioenergy feedstock. The monolignol biosynthesis pathway is a major focus for altering the abundance and composition of lignin. Caffeoyl coenzyme-A O-methyltransferase (CCoAOMT) is an S-adenosyl methionine (SAM)-dependent O-methyltransferase that methylates caffeoyl-CoA to generate feruloyl-CoA, an intermediate required for the biosynthesis of both G- and S-lignin. SbCCoAOMT was overexpressed to assess the impact of increasing the amount of this enzyme on biomass composition. SbCCoAOMT overexpression increased both soluble and cell wall-bound (esterified) ferulic and sinapic acids, however lignin concentration and its composition (S/G ratio) remained unaffected. This increased deposition of hydroxycinnamic acids in these lines led to an increase in total energy content of the stover. In stalk and leaf midribs, the increased histochemical staining and autofluorescence in the cell walls of the SbCCoAOMT overexpression lines also indicate increased phenolic deposition within cell walls, which is consistent with the chemical analyses of soluble and wall-bound hydroxycinnamic acids. The growth and development of overexpression lines were similar to wild-type plants. Likewise, RNA-seq and metabolite profiling showed that global gene expression and metabolite levels in overexpression lines were also relatively similar to wild-type plants. Our results demonstrate that SbCCoAOMT overexpression significantly altered cell wall composition through increases in cell wall associated hydroxycinnamic acids without altering lignin concentration or affecting plant growth and development.

Indexed as

Cell WallCoumaric AcidsGene ExpressionGene Expression Regulation, PlantLigninMethyltransferasesOptical ImagingPlant LeavesPlant ProteinsPlants, Genetically ModifiedSequence Analysis, RNASorghumcaffeoyl-CoA O-methyltransferaseCoumaric Acidsferulic acidLigninMethyltransferasesPlant Proteinssinapinic acid

Identifiers

PMID30289910
PMCPMC6173380
OpenAlexW2894983839

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.