Evidence map›Paper›PMID 30289745›Full record

ArticlePhysiological genomics2018

Proteome and transcriptome profiling of equine myofibrillar myopathy identifies diminished peroxiredoxin 6 and altered cysteine metabolic pathways.

Stephanie J Valberg, Sudeep Perumbakkam, Erica C McKenzie, Carrie J Finno

Open access · hybridAbstract read
In one paragraph

Article in Physiological genomics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 4 institutions in 1 country.

Stephanie J ValbergMcPhail Equine Performance Center, Department of Large Animal Clinical Sciences, Michigan State University, East Lansing, Michigan.ORCID 0000-0001-5978-7010
Sudeep PerumbakkamDepartment of Large Animal Clinical Sciences, Michigan State University , East Lansing, Michigan.
Erica C McKenzieDepartment of Clinical Sciences, Carlson College of Veterinary Medicine, Oregon State University , Corvallis, Oregon.
Carrie J FinnoDepartment of Population Health and Reproduction, University of California Davis , Davis, California.
Michigan State University · USOregon State University · USUniversity of California, Davis · USUniversity of Minnesota · US

Funding

Molecular pathogenesis of alpha-tocopherol associated neuroaxonal dystrophy in anK01OD015134 · OD · UNIVERSITY OF MINNESOTA · PI FINNO, CARRIE · 2013 to 2017
$599k
NCATS NIH HHS L40 TR001136NIH HHS K01 OD015134
6 · The paper itself

Abstract

Equine myofibrillar myopathy (MFM) causes exertional muscle pain and is characterized by myofibrillar disarray and ectopic desmin aggregates of unknown origin. To investigate the pathophysiology of MFM, we compared resting and 3 h postexercise transcriptomes of gluteal muscle and the resting skeletal muscle proteome of MFM and control Arabian horses with RNA sequencing and isobaric tags for relative and absolute quantitation analyses. Three hours after exercise, 191 genes were identified as differentially expressed (DE) in MFM vs. control muscle with >1 log

Indexed as

AnimalsAntioxidantsBasement MembraneCell DifferentiationCysteineFatty AcidsFemaleGene Expression ProfilingHorsesMaleMetabolic Networks and PathwaysMuscle ProteinsMuscle, SkeletalMyopathies, Structural, CongenitalPeroxiredoxin VIPhysical Conditioning, AnimalAntioxidantsCysteineFatty AcidsMuscle ProteinsPeroxiredoxin VIProteomeReactive Oxygen SpeciesantioxidanthorsemyopathyproteomeRNA-Seqtranscriptome

Identifiers

PMID30289745
PMCPMC6337024
OpenAlexW2895364039

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.