Evidence map›Paper›PMID 30289729›Full record

ArticleSLAS technology2019

Mutation Profiles in Glioblastoma 3D Oncospheres Modulate Drug Efficacy.

Kelli M Wilson, Lesley A Mathews-Griner, Tara Williamson, Rajarshi Guha, Lu Chen, Paul Shinn, Crystal McKnight, Sam Michael, Carleen Klumpp-Thomas, Zev A Binder and 4 more

Open access · hybridAbstract readEvaluation Study
In one paragraph

Article in SLAS technology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 20 citations in OpenAlex.

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  12. Anticancer drug synergy prediction in understudied tissues using transfer learning.Journal of the American Medical Informatics Association : JAMIA · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Kelli M Wilson1 Department of Neurosurgery, Johns Hopkins University School of Medicine, Baltimore MD, USA.ORCID 0000-0003-2636-2766
Lesley A Mathews-Griner2 Division of Pre-Clinical Innovation, National Center for Advancing Translational Sciences, National Institutes of Health, Rockville MD, USA.
Tara Williamson1 Department of Neurosurgery, Johns Hopkins University School of Medicine, Baltimore MD, USA.
Rajarshi Guha2 Division of Pre-Clinical Innovation, National Center for Advancing Translational Sciences, National Institutes of Health, Rockville MD, USA.
Lu Chen2 Division of Pre-Clinical Innovation, National Center for Advancing Translational Sciences, National Institutes of Health, Rockville MD, USA.
Paul Shinn2 Division of Pre-Clinical Innovation, National Center for Advancing Translational Sciences, National Institutes of Health, Rockville MD, USA.
Crystal McKnight2 Division of Pre-Clinical Innovation, National Center for Advancing Translational Sciences, National Institutes of Health, Rockville MD, USA.
Sam Michael2 Division of Pre-Clinical Innovation, National Center for Advancing Translational Sciences, National Institutes of Health, Rockville MD, USA.
Carleen Klumpp-Thomas2 Division of Pre-Clinical Innovation, National Center for Advancing Translational Sciences, National Institutes of Health, Rockville MD, USA.
Zev A Binder3 Department of Neurosurgery, Perelmen School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
Marc Ferrer2 Division of Pre-Clinical Innovation, National Center for Advancing Translational Sciences, National Institutes of Health, Rockville MD, USA.
Gary L Gallia1 Department of Neurosurgery, Johns Hopkins University School of Medicine, Baltimore MD, USA.
Craig J Thomas2 Division of Pre-Clinical Innovation, National Center for Advancing Translational Sciences, National Institutes of Health, Rockville MD, USA.
Gregory J Riggins1 Department of Neurosurgery, Johns Hopkins University School of Medicine, Baltimore MD, USA.
National Institutes of Health · USJohns Hopkins University · USUniversity of Pennsylvania · US

Funding

Research Services Section (RSS)ZICTR000242 · NCATS · NATIONAL CENTER FOR ADVANCING TRANSLATIONAL SCIENCES · PI WILSON, KELLI · 2015 to 2025
$64.9M
NIH Chemical Genomics CenterZIBHG200319 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI AUSTIN, CHRISTOPHER P · 2010 to 2011
$55.9M
Intramural NIH HHS ZIB HG200319
6 · The paper itself

Abstract

Glioblastoma (GBM) is a lethal brain cancer with a median survival time of approximately 15 months following treatment. Common in vitro GBM models for drug screening are adherent and do not recapitulate the features of human GBM in vivo. Here we report the genomic characterization of nine patient-derived, spheroid GBM cell lines that recapitulate human GBM characteristics in orthotopic xenograft models. Genomic sequencing revealed that the spheroid lines contain alterations in GBM driver genes such as PTEN, CDKN2A, and NF1. Two spheroid cell lines, JHH-136 and JHH-520, were utilized in a high-throughput drug screen for cell viability using a 1912-member compound library. Drug mechanisms that were cytotoxic in both cell lines were Hsp90 and proteasome inhibitors. JHH-136 was uniquely sensitive to topoisomerase 1 inhibitors, while JHH-520 was uniquely sensitive to Mek inhibitors. Drug combination screening revealed that PI3 kinase inhibitors combined with Mek or proteasome inhibitors were synergistic. However, animal studies to test these drug combinations in vivo revealed that Mek inhibition alone was superior to the combination treatments. These data show that these GBM spheroid lines are amenable to high-throughput drug screening and that this dataset may deliver promising therapeutic leads for future GBM preclinical studies.

Indexed as

MutationAntineoplastic AgentsCell SurvivalDrug Evaluation, PreclinicalGlioblastomaHigh-Throughput Screening AssaysHumansSpheroids, CellularTumor Cells, CulturedAntineoplastic Agentsdrug combination screeningglioblastomahigh-throughput screeningspheroid

Identifiers

PMID30289729
PMCPMC7058093
OpenAlexW2895489266

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.