Evidence map›Paper›PMID 30287385›Full record

ArticleMechanisms of development2019

Cog4 is required for protrusion and extension of the epithelium in the developing semicircular canals.

Aurélie Clément, Bernardo Blanco-Sánchez, Judy L Peirce, Monte Westerfield

Registry-linked trialOpen access · greenAbstract read
In one paragraph

Article in Mechanisms of development, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02450851 (Clinical and Genetic Evaluation of Patients With Undiagnosed Disorders Through the Undiagnosed Diseases Network), which is not on this map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
0.6field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02450851 recruitingnot on this map

Clinical and Genetic Evaluation of Patients With Undiagnosed Disorders Through the Undiagnosed Diseases Network

TypeobservationalSponsorNational Human Genome Research Institute (NHGRI)Ran2015 to 2028Enrolled20,000ConditionsGenetic Disease
3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 12 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Knockout ofBiomedicines · 2021
    Article
  8. A Dominant Heterozygous Mutation inFrontiers in cell and developmental biology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Aurélie ClémentInstitute of Neuroscience, University of Oregon, Eugene, OR 97403, USA.
Bernardo Blanco-SánchezInstitute of Neuroscience, University of Oregon, Eugene, OR 97403, USA.
Judy L PeirceInstitute of Neuroscience, University of Oregon, Eugene, OR 97403, USA.
Monte WesterfieldInstitute of Neuroscience, University of Oregon, Eugene, OR 97403, USA. Electronic address: monte@uoneuro.uoregon.edu.
University of Oregon · US

Funding

Zebrafish FacilityP01HD022486 · NICHD · UNIVERSITY OF OREGON · PI EISEN, JUDITH S · 1987 to 2017
$28.8M
Zebrafish CoreU54NS093793 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI BELLEN, HUGO J · 2015 to 2022
$7.5M
The functions of PDZ domain scaffold proteins in Usher syndromeR01DC010447 · NIDCD · UNIVERSITY OF OREGON · PI WESTERFIELD, MONTE · 2010 to 2014
$1.5M
NICHD NIH HHS P01 HD022486NIDCD NIH HHS R01 DC010447NINDS NIH HHS U54 NS093793
6 · The paper itself

Abstract

The semicircular canals in the inner ear sense angular acceleration. In zebrafish, the semicircular canals develop from epithelial projections that grow toward each other and fuse to form pillars. The growth of the epithelial projections is driven by the production and secretion of extracellular matrix components by the epithelium. The conserved oligomeric Golgi 4 protein, Cog4, functions in retrograde vesicle transport within the Golgi and mutations can lead to sensory neural hearing loss. In zebrafish cog4 mutants, the inner ear is smaller and the number of hair cells is reduced. Here, we show that formation of the pillars is delayed and that secretion of extracellular matrix components (ECM) is impaired in cog4

Indexed as

AnimalsEpitheliumExtracellular MatrixGene Expression Regulation, DevelopmentalHair Cells, Auditory, InnerHearing LossMorphogenesisMutationSemicircular CanalsZebrafishZebrafish ProteinsZebrafish ProteinsCog4Inner earPillarSemicircular canalZebrafish

Identifiers

PMID30287385
PMCPMC6226009
OpenAlexW2894800059

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.