Evidence map›Paper›PMID 30286427›Full record

ArticleVirology2018

Insertion position as well as the inserted TRS and gene sequences differentially affect the retention of foreign gene expression by simian hemorrhagic fever virus (SHFV).

Han Di, Esther K Morantz, Heena Sadhwani, Joseph C Madden, Margo A Brinton

Abstract read
In one paragraph

Article in Virology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Han DiDepartment of Biology, Georgia State University, Atlanta, GA 30303, United States.
Esther K MorantzDepartment of Biology, Georgia State University, Atlanta, GA 30303, United States.
Heena SadhwaniDepartment of Biology, Georgia State University, Atlanta, GA 30303, United States.
Joseph C MaddenDepartment of Biology, Georgia State University, Atlanta, GA 30303, United States.
Margo A BrintonDepartment of Biology, Georgia State University, Atlanta, GA 30303, United States. Electronic address: mbrinton@gsu.edu.
Georgia State University · US

Funding

Development of a new model of viral hemorrhagic fever. R21AI073824 · NIAID · GEORGIA STATE UNIVERSITY · PI BRINTON, MARGO A · 2007 to 2008
$358k
NIAID NIH HHS R21 AI073824
6 · The paper itself

Abstract

Recombinant SHFV infectious cDNA clones expressing a foreign gene from an additional sg mRNA were constructed. Two 3' genomic region sites, between ORF4' and ORF2b and between ORF4 and ORF5, were utilized for insertion of the myxoma M013 gene with a C-terminal V5 tag followed by one of the three inserted transcription regulatory sequences (TRS), TRS2', TRS4' or TRS7. M013 insertion at the ORF4'/ORF2b site but not the ORF4/ORF5 site generated progeny virus but only the recombinant virus with an inserted TRS2' retained the entire M013 gene through passage four. Insertion of an auto-fluorescent protein gene, iLOV, with an inserted TRS2' at the ORF4'/ORF2b site, generated viable progeny virus. iLOV expression was maintained through passage eight. Although regulation of SHFV subgenomic RNA synthesis is complex, the ORF4'/ORF2b site, which is located between the two sets of minor structural proteins, is able to tolerate foreign gene insertion.

Indexed as

ArterivirusBase SequenceGene Expression Regulation, ViralReassortant VirusesRegulatory Sequences, Ribonucleic AcidRNA, MessengerRNA, ViralViral ProteinsRegulatory Sequences, Ribonucleic AcidRNA, MessengerRNA, ViralViral ProteinsForeign gene expressioniLOVInfectious cDNA cloneM013Simian hemorrhagic fever virusTranscription regulatory sequence (TRS)

Identifiers

PMID30286427
PMCPMC6294337
OpenAlexW2895392784

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.