Evidence map›Paper›PMID 30286167›Full record

ArticlePloS one2018

4.1Ba is necessary for glutamatergic synapse formation in the sensorimotor circuit of developing zebrafish.

Javier Fierro, Dylan R Haynes, Philip Washbourne

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Javier FierroInstitute of Neuroscience, University of Oregon, Eugene, Oregon, United States of America.
Dylan R HaynesInstitute of Neuroscience, University of Oregon, Eugene, Oregon, United States of America.
Philip WashbourneInstitute of Neuroscience, University of Oregon, Eugene, Oregon, United States of America.ORCID 0000-0003-1851-1282
University of Oregon · US

Funding

Zebrafish FacilityP01HD022486 · NICHD · UNIVERSITY OF OREGON · PI PARTHASARATHY, RAGHUVEER · 1987 to 2017
$28.8M
MOLECULAR BIOLOGY AND BIOPHYSICST32GM007759 · NIGMS · UNIVERSITY OF OREGON · PI NOLEN, BRADLEY J · 1985 to 2021
$8.5M
Glutamate receptor recruitment to new synapses in vivoR01NS065795 · NINDS · UNIVERSITY OF OREGON · PI WASHBOURNE, PHILIP ERIC · 2009 to 2013
$1.7M
NICHD NIH HHS P01 HD022486NIGMS NIH HHS T32 GM007759NINDS NIH HHS R01 NS065795
6 · The paper itself

Abstract

During the process of synapse formation, thousands of proteins assemble at prospective sites of cell-cell communication. Although many of these proteins have been identified, the roles they play in generating functional connections during development remain unknown. 4.1 scaffolding proteins have been implicated in synapse formation and maturation in vitro, but in vivo studies for some family members have suggested these proteins are not important for this role. We examined the role of family member 4.1B because it has been implicated in glutamatergic synaptogenesis, but has not been described in vivo. We identified two 4.1B genes in zebrafish, 4.1Ba and 4.1Bb, by sequence comparisons and synteny analysis. In situ hybridization shows these genes are differentially expressed, with 4.1Ba expressed primarily in the nervous system and 4.1Bb expressed in the nervous system and muscle, but not the spinal cord. We focused our studies on 4.1Ba in the spinal cord. 4.1Ba knockdown reduced the number of glutamatergic synapses at caudal primary motor neurons and caused an increase in the duration of touch-evoked coiling. These results suggest 4.1Ba is important for the formation of functional glutamatergic synapses in the developing zebrafish spinal cord.

Indexed as

AnimalsCell CommunicationGene Expression Regulation, DevelopmentalMicrofilament ProteinsMotor NeuronsNeurogenesisSpinal CordSynapsesZebrafishZebrafish ProteinsMicrofilament ProteinsZebrafish Proteins

Identifiers

PMID30286167
PMCPMC6171929
OpenAlexW2895180522

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.