ArticleBMC plant biology2018
Genome wide identification and predicted functional analyses of NAC transcription factors in Asian pears.
Article in BMC plant biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.
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Who cites it
26 citing papers in PubMed, 61 citations in OpenAlex.
- Genome-Wide Identification and Characterization of the NAC Transcription Factor Family inPlants (Basel, Switzerland) · 2026Article
- Genome-Wide Identification, Characterization, and Expression Analysis of the NAC Transcription Factor Family in Sweet Cherry (Plants (Basel, Switzerland) · 2025Article
- Genome-Wide Identification and Expression Analysis ofInternational journal of molecular sciences · 2023Article
- Genome-Wide Identification, Evolution and Expression Profile Analysis of NAC Transcription Factor inCurrent issues in molecular biology · 2023Article
- Characterization of the NAC Transcription Factor in Passion Fruit (Plants (Basel, Switzerland) · 2023Article
- Genome-Wide Association Study of Arabinoxylan Content from a 562 Hexaploid Wheat Collection.Plants (Basel, Switzerland) · 2023Article
- The NAC transcription factors play core roles in flowering and ripening fundamental to fruit yield and quality.Frontiers in plant science · 2023Review
- Genome-Wide Characterization and Evolutionary Expansion of Poplar NAC Transcription Factors and Their Tissue-Specific Expression Profiles under Drought.International journal of molecular sciences · 2022Article
- Genome-Wide Identification and Expression Analysis of theInternational journal of molecular sciences · 2022Article
- Genome-wide analyses of the mung bean NAC gene family reveals orthologs, co-expression networking and expression profiling under abiotic and biotic stresses.BMC plant biology · 2022Article
- Genome-Wide Identification and Analysis ofInternational journal of molecular sciences · 2022Article
- Article
- Review
- Comprehensive analysis of the NAC transcription factor gene family inFrontiers in plant science · 2022Article
- A systems genetics approach reveals PbrNSC as a regulator of lignin and cellulose biosynthesis in stone cells of pear fruit.Genome biology · 2021Article
- High-quality genome assembly of 'Cuiguan' pear (Pyrus pyrifolia) as a reference genome for identifying regulatory genes and epigenetic modifications responsible for bud dormancy.Horticulture research · 2021Article
- Evolutionary Divergence and Biased Expression of NAC Transcription Factors in Hexaploid Bread Wheat (Plants (Basel, Switzerland) · 2021Article
- Genome-wide identification and comprehensive analysis of NAC family genes involved in fruit development in kiwifruit (Actinidia).BMC plant biology · 2021Article
- Genome-Wide Identification of NAC Transcription Factors and Their Functional Prediction of Abiotic Stress Response in Peanut.Frontiers in genetics · 2021Article
- Article
Corrections and comments
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Authors and funding
7 authors at 2 institutions in 2 countries.
Funding
Abstract
backgroundNAC proteins contribute to diverse plant developmental processes as well as tolerances to biotic and abiotic stresses. The pear genome had been decoded and provided the basis for the genome-wide analysis to find the evolution, duplication, gene structures and predicted functions of PpNAC transcription factors.
resultsA total of 185 PpNAC genes were found in pear, of which 148 were mapped on chromosomes while 37 were on unanchored scaffolds. Phylogeny split the NAC genes into 6 clades (Group1- Group6) with their sub clades (~ subgroup A to subgroup H) and each group displayed common motifs with no/minor change. The numbers of exons in each group varied from 1 to 12 with an average of 3 while 44 pairs from all groups showed their duplication events. qPCR and RNA-Seq data analyses in different pear cultivars/species revealed some predicted functions of PpNAC genes i.e. PpNACs 37, 61, 70 (2A), 53, 151(2D), 10, 92, 130 and 154 (3D) were potentially involved in bud endodormancy, PpNACs 61, 70 (2A), 172, 176 and 23 (4E) were associated with fruit pigmentations in blue light, PpNACs 127 (1E), 46 (1G) and 56 (5A) might be related to early, middle and late fruit developments respectively. Besides, all genes from subgroups 2D and 3D were found to be related with abiotic stress (cold, salt and drought) tolerances by targeting the stress responsive genes in pear.
conclusionsThe present genome-wide analysis provided valuable information for understanding the classification, motif and gene structure, evolution and predicted functions of NAC gene family in pear as well as in higher plants. NAC TFs play diverse and multifunctional roles in biotic and abiotic stresses, growth and development and fruit ripening and pigmentation through multiple pathways in pear.
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