Evidence map›Paper›PMID 30285245›Full record

ArticleRheumatology (Oxford, England)2019

Discovery of SERPINA3 as a candidate urinary biomarker of lupus nephritis activity.

Jessica L Turnier, Hermine I Brunner, Michael Bennett, Ashwaq Aleed, Gaurav Gulati, Wendy D Haffey, Sherry Thornton, Michael Wagner, Prasad Devarajan, David Witte and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Rheumatology (Oxford, England), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 32 citations in OpenAlex.

  1. Pooled it
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  15. Urinary Protein and Peptide Markers in Chronic Kidney Disease.International journal of molecular sciences · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Jessica L TurnierRheumatology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Hermine I BrunnerRheumatology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Michael BennettNephrology and Hypertension, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Ashwaq AleedDepartment of Pediatrics, Qassim University College of Medicine, Qassim, Saudi Arabia.
Gaurav GulatiImmunology, Allergy and Rheumatology, University of Cincinnati College of Medicine, Cincinnati, OH, USA.
Wendy D HaffeyCancer Biology, University of Cincinnati College of Medicine, Cincinnati, OH, USA.
Sherry ThorntonRheumatology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Michael WagnerBiomedical Informatics, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Prasad DevarajanNephrology and Hypertension, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
David WittePathology and Laboratory Medicine, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Kenneth D GreisCancer Biology, University of Cincinnati College of Medicine, Cincinnati, OH, USA.
Bruce AronowBiomedical Informatics, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Cincinnati Children's Hospital Medical Center · USUniversity of Cincinnati Medical Center · USQassim University · SA

Funding

Proteomics CoreP50DK096418 · NIDDK · CINCINNATI CHILDRENS HOSP MED CTR · PI DEVARAJAN, PRASAD · 2012 to 2021
$8.4M
Tissue Repository CoreP30AR070549 · NIAMS · CINCINNATI CHILDRENS HOSP MED CTR · PI Leah Claire Kottyan · 2016 to 2026
$7.7M
CINCINNATI TRAINING PROGRAM IN PEDIATRIC RHEUMATOLOGYRESEARCHT32AR069512 · NIAMS · CINCINNATI CHILDRENS HOSP MED CTR · PI ALEXEI A GROM, Grant Sanford Schulert · 2016 to 2026
$1.6M
Innovative Efficacy Measures of Lupus Nephritis TherapiesU01AR065098 · NIAMS · CINCINNATI CHILDRENS HOSP MED CTR · PI BENNETT, MICHAEL R., BRUNNER, HERMINE I · 2013 to 2015
$715k
Enhanced proteomics capabilities for quantitation of proteins with a triple quadS10RR027015 · NCRR · UNIVERSITY OF CINCINNATI · PI GREIS, KENNETH DONALD · 2010 to 2010
$426k
NCRR NIH HHS S10 RR027015NIAMS NIH HHS P30 AR070549NIAMS NIH HHS T32 AR069512NIAMS NIH HHS U01 AR065098NIDDK NIH HHS P50 DK096418
6 · The paper itself

Abstract

Objectives: We used an unbiased proteomics approach to identify candidate urine biomarkers (CUBMs) predictive of LN chronicity and pursued their validation in a larger cohort. Methods: In this cross-sectional pilot study, we selected urine collected at kidney biopsy from 20 children with varying levels of LN damage (discovery cohort) and performed proteomic analysis using isobaric tags for relative and absolute quantification (iTRAQ). We identified differentially excreted proteins based on degree of LN chronicity and sought to distinguish markers exhibiting different relative expression patterns using hierarchically clustered log10-normalized relative abundance data with linked and distinct functions by biological network analyses. For each CUBM, we performed specific ELISAs on urine from a validation cohort (n = 41) and analysis of variance to detect differences between LN chronicity, with LN activity adjustment. We evaluated for CUBM expression in LN biopsies with immunohistochemistry. Results: iTRAQ detected 112 proteins in urine from the discovery cohort, 51 quantifiable in all replicates. Simple analysis of variance revealed four differentially expressed, chronicity-correlated proteins (P-values < 0.05). Further correlation and network analyses led to selection of seven CUBMs for LN chronicity. In the validation cohort, none of the CUBMs distinguished LN chronicity degree; however, urine SERPINA3 demonstrated a moderate positive correlation with LN histological activity. Immunohistochemistry further demonstrated SERPINA3 staining in proximal tubular epithelial and endothelial cells. Conclusion: We identified SERPINA3, a known inhibitor of neutrophil cathepsin G and angiotensin II production, as a potential urine biomarker to help quantify LN activity.

Indexed as

AdolescentAdultBiomarkersBiopsyChildCross-Sectional StudiesFemaleHumansKidneyLupus NephritisMalePilot ProjectsProteinuriaProteomicsSerpinsYoung AdultBiomarkersSERPINA3 protein, humanSerpins

Identifiers

PMID30285245
PMCPMC6343468
OpenAlexW2894577293

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.