Evidence map›Paper›PMID 30284819›Full record

ArticleEnvironmental science & technology2018

Screening and Characterization of Novel Polyesterases from Environmental Metagenomes with High Hydrolytic Activity against Synthetic Polyesters.

Mahbod Hajighasemi, Anatoli Tchigvintsev, Boguslaw Nocek, Robert Flick, Ana Popovic, Tran Hai, Anna N Khusnutdinova, Greg Brown, Xiaohui Xu, Hong Cui and 11 more

Open access · greenAbstract read
In one paragraph

Article in Environmental science & technology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 93 citations in OpenAlex.

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  12. Enzymatic degradation of polylactic acid (PLA).Applied microbiology and biotechnology · 2024
    Review
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  19. Article
  20. Biodegradation of Biodegradable Polymers in Mesophilic Aerobic Environments.International journal of molecular sciences · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 5 institutions in 5 countries.

Mahbod HajighasemiDepartment of Chemical Engineering and Applied Chemistry , University of Toronto , Toronto , ON M5S 3E5 , Canada.
Anatoli TchigvintsevDepartment of Chemical Engineering and Applied Chemistry , University of Toronto , Toronto , ON M5S 3E5 , Canada.
Boguslaw NocekMidwest Center for Structural Genomics and Structural Biology Center, Biosciences Division , Argonne National Laboratory , Argonne , Illinois 60439 , United States.
Robert FlickDepartment of Chemical Engineering and Applied Chemistry , University of Toronto , Toronto , ON M5S 3E5 , Canada.
Ana PopovicDepartment of Chemical Engineering and Applied Chemistry , University of Toronto , Toronto , ON M5S 3E5 , Canada.
Tran HaiSchool of Biological Sciences , Bangor University , Gwynedd LL57 2UW , U.K.
Anna N KhusnutdinovaDepartment of Chemical Engineering and Applied Chemistry , University of Toronto , Toronto , ON M5S 3E5 , Canada.
Greg BrownDepartment of Chemical Engineering and Applied Chemistry , University of Toronto , Toronto , ON M5S 3E5 , Canada.
Xiaohui XuDepartment of Chemical Engineering and Applied Chemistry , University of Toronto , Toronto , ON M5S 3E5 , Canada.
Hong CuiDepartment of Chemical Engineering and Applied Chemistry , University of Toronto , Toronto , ON M5S 3E5 , Canada.
Julia AnstettDepartment of Chemical Engineering and Applied Chemistry , University of Toronto , Toronto , ON M5S 3E5 , Canada.
Tatyana N ChernikovaSchool of Biological Sciences , Bangor University , Gwynedd LL57 2UW , U.K.
Thomas BrülsCommissariat à l'Energie Atomique et aux Energies Alternatives (CEA), Direction de la Recherche Fondamentale, Institut de Génomique , Université de d'Evry Val d'Essonne (UEVE), Centre National de la Recherche Scientifique (CNRS), UMR8030, Génomique métabolique , Evry , France.
Denis Le PaslierUniversité de d'Evry Val d'Essonne (UEVE), Centre National de la Recherche Scientifique (CNRS) , UMR8030, Génomique métabolique, Commissariat à l'Energie Atomique et aux Energies Alternatives (CEA), Direction de la Recherche Fondamentale, Institut de Génomique , Evry , France.
Michail M YakimovInstitute for Coastal Marine Environment , CNR , 98122 Messina , Italy.
Andrzej JoachimiakMidwest Center for Structural Genomics and Structural Biology Center, Biosciences Division , Argonne National Laboratory , Argonne , Illinois 60439 , United States.
Olga V GolyshinaSchool of Biological Sciences , Bangor University , Gwynedd LL57 2UW , U.K.
Alexei SavchenkoDepartment of Chemical Engineering and Applied Chemistry , University of Toronto , Toronto , ON M5S 3E5 , Canada.
Peter N GolyshinSchool of Biological Sciences , Bangor University , Gwynedd LL57 2UW , U.K.ORCID 0000-0002-5433-0350
Elizabeth A EdwardsDepartment of Chemical Engineering and Applied Chemistry , University of Toronto , Toronto , ON M5S 3E5 , Canada.ORCID 0000-0002-8071-338X
Alexander F YakuninDepartment of Chemical Engineering and Applied Chemistry , University of Toronto , Toronto , ON M5S 3E5 , Canada.ORCID 0000-0003-0813-6490
University of Toronto · CABangor University · GBArgonne National Laboratory · USCentre National de la Recherche Scientifique · FRInstitute for Coastal Marine Environment · IT

Funding

THE MIDWEST CENTER FOR STRUCTURAL GENOMICSP50GM062414 · NIGMS · UNIVERSITY OF CHICAGO · PI JOACHIMIAK, ANDRZEJ JOACHIMIAK · 2000 to 2004
$33.2M
The Midwest Center for Structural Genomics - Community ResourceR24GM115586 · NIGMS · UNIVERSITY OF CHICAGO · PI JOACHIMIAK, ANDRZEJ · 2015 to 2017
$2.8M
NIGMS NIH HHS P50 GM062414NIGMS NIH HHS R24 GM115586
6 · The paper itself

Abstract

The continuous growth of global plastics production, including polyesters, has resulted in increasing plastic pollution and subsequent negative environmental impacts. Therefore, enzyme-catalyzed depolymerization of synthetic polyesters as a plastics recycling approach has become a focus of research. In this study, we screened over 200 purified uncharacterized hydrolases from environmental metagenomes and sequenced microbial genomes and identified at least 10 proteins with high hydrolytic activity against synthetic polyesters. These include the metagenomic esterases MGS0156 and GEN0105, which hydrolyzed polylactic acid (PLA), polycaprolactone, as well as bis(benzoyloxyethyl)-terephthalate. With solid PLA as a substrate, both enzymes produced a mixture of lactic acid monomers, dimers, and higher oligomers as products. The crystal structure of MGS0156 was determined at 1.95 Å resolution and revealed a modified α/β hydrolase fold, with a lid domain and highly hydrophobic active site. Mutational studies of MGS0156 identified the residues critical for hydrolytic activity against both polyester and monoester substrates, with two-times higher polyesterase activity in the MGS0156 L169A mutant protein. Thus, our work identified novel, highly active polyesterases in environmental metagenomes and provided molecular insights into their activity, thereby augmenting our understanding of enzymatic polyester hydrolysis.

Indexed as

MetagenomePolyestersEsterasesHydrolasesHydrolysisEsterasesHydrolasesPolyesters

Identifiers

PMID30284819
PMCPMC12447631
OpenAlexW2895417149

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.