Evidence map›Paper›PMID 30284145›Full record

ReviewTransgenic research2018

In vivo epigenome editing and transcriptional modulation using CRISPR technology.

Cia-Hin Lau, Yousin Suh

Abstract readReview
In one paragraph

Review in Transgenic research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. CRISPR/Cas9-based nanodelivery systems for precision gene editing in neuroinflammation.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2026
    Review
  3. Article
  4. Review
  5. Review
  6. Review
  7. Review
  8. Article
  9. Review
  10. Review
  11. Review
  12. Expression and Functional Analysis of the Compact ThermophilicInternational journal of molecular sciences · 2023
    Article
  13. Article
  14. Mechanisms regulating the CRISPR-Cas systems.Frontiers in microbiology · 2023
    Review
  15. Zebrafish Models of Paediatric Brain Tumours.International journal of molecular sciences · 2022
    Review
  16. Article
  17. Review
  18. Article
  19. Review
  20. CRISPR Interference-Potential Application in Retinal Disease.International journal of molecular sciences · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 2 countries.

Cia-Hin LauDepartment of Biomedical Engineering, City University of Hong Kong, Room Y1618, Academic 1, 83 Tat Chee Avenue, Hong Kong, SAR, China. lauciahin_4275@yahoo.com.ORCID 0000-0002-4528-0363
Yousin SuhDepartment of Genetics, Michael F. Price Center, Albert Einstein College of Medicine, 1301 Morris Park Avenue, Room 475, Bronx, NY, 10461, USA. yousin.suh@einstein.yu.edu.
Albert Einstein College of Medicine · USCity University of Hong Kong · HK

Funding

THE IMPACT OF CELLULAR DEFENSE ON THE ROLE OF Ku80 IN GENOME MAINTENANCE AND LONGP01AG017242 · NIA · UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT · PI VIJG, JAN · 1999 to 2023
$46.1M
Validation and characterization of the identified variants associated with human longevity in mouse modelsU19AG056278 · NIA · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI Zhengdong Zhang · 2017 to 2026
$24.5M
Systems Modeling of Alzheimers Disease in C. elegansRF1AG057341 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MURPHY, COLEEN TARA, SUH, YOUSIN · 2017 to 2017
$3.7M
(PQB4) Age-cancer interplay of genome and epi-genome in human lungR01CA180126 · NCI · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI AUTON, ADAM, SPIVACK, SIMON D · 2013 to 2016
$2.8M
New Methods to Uncover Global Transcriptional Programs for Disease Risk VariantsR01GM104459 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI SUH, YOUSIN · 2013 to 2016
$2.5M
NCI NIH HHS R01 CA180126NIA NIH HHS P01 AG017242NIA NIH HHS RF1 AG057341NIA NIH HHS U19 AG056278NIGMS NIH HHS R01 GM104459
6 · The paper itself

Abstract

The rapid advancement of CRISPR technology has enabled targeted epigenome editing and transcriptional modulation in the native chromatin context. However, only a few studies have reported the successful editing of the epigenome in adult animals in contrast to the rapidly growing number of in vivo genome editing over the past few years. In this review, we discuss the challenges facing in vivo epigenome editing and new strategies to overcome the huddles. The biggest challenge has been the difficulty in packaging dCas9 fusion proteins required for manipulation of epigenome into the adeno-associated virus (AAV) delivery vehicle. We review the strategies to address the AAV packaging issue, including small dCas9 orthologues, truncated dCas9 mutants, a split-dCas9 system, and potent truncated effector domains. We discuss the dCas9 conjugation strategies to recruit endogenous chromatin modifiers and remodelers to specific genomic loci, and recently developed methods to recruit multiple copies of the dCas9 fusion protein, or to simultaneous express multiple gRNAs for robust epigenome editing or synergistic transcriptional modulation. The use of Cre-inducible dCas9-expressing mice or a genetic cross between dCas9- and sgRNA-expressing flies has also helped overcome the transgene delivery issue. We provide perspective on how a combination use of these strategies can facilitate in vivo epigenome editing and transcriptional modulation.

Indexed as

CRISPR-Cas SystemsEpigenesis, GeneticEpigenomicsGene EditingTranscription, GeneticDNA MethylationHumansPromoter Regions, GeneticAdeno-associated virusCis-regulatory elementsCRISPR activationCRISPR interferenceEpigenetic regulationEpigenome editing

Identifiers

PMID30284145
PMCPMC6261694
OpenAlexW2895390373

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.