Evidence map›Paper›PMID 30284140›Full record

ReviewJournal of industrial microbiology & biotechnology2019

Natural products from anaerobes.

Jeffrey S Li, Colin Charles Barber, Wenjun Zhang

Open access · bronzeAbstract readReview
In one paragraph

Review in Journal of industrial microbiology & biotechnology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Mining the Metabolic Capacity of Clostridium sporogenes Aided by Machine Learning.Angewandte Chemie (International ed. in English) · 2024
    Article
  6. Article
  7. Article
  8. Biosynthesis of Isonitrile- and Alkyne-Containing Natural Products.Annual review of chemical and biomolecular engineering · 2022
    Review
  9. Review
  10. Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Reconstitution of polythioamide antibiotic backbone formation reveals unusual thiotemplated assembly strategy.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jeffrey S LiDepartment of Chemical and Biomolecular Engineering, University of California Berkeley, Berkeley, CA, USA.
Colin Charles BarberDepartment of Plant and Microbial Biology, University of California Berkeley, Berkeley, CA, USA.
Wenjun ZhangDepartment of Chemical and Biomolecular Engineering, University of California Berkeley, Berkeley, CA, USA. wjzhang@berkeley.edu.ORCID http://orcid.org/0000-0001-9348-972X
University of California, Berkeley · US

Funding

In Situ Natural Product Labeling and ApplicationsDP2AT009148 · NCCIH · UNIVERSITY OF CALIFORNIA BERKELEY · PI ZHANG, WENJUN · 2015 to 2020
$2.8M
National Center for Complementary and Alternative Medicine DP2AT009148NCCIH NIH HHS DP2 AT009148
6 · The paper itself

Abstract

Natural product discovery in the microbial world has historically been biased toward aerobes. Recent in silico analysis demonstrates that genomes of anaerobes encode unexpected biosynthetic potential for natural products, however, chemical data on natural products from the anaerobic world are extremely limited. Here, we review the current body of work on natural products isolated from strictly anaerobic microbes, including recent genome mining efforts to discover polyketides and non-ribosomal peptides from anaerobes. These known natural products of anaerobes have demonstrated interesting molecular scaffolds, biosynthetic logic, and/or biological activities, making anaerobes a promising reservoir for future natural product discovery.

Indexed as

Bacteria, AnaerobicBiological ProductsBiosynthetic PathwaysChromansMultigene FamilyNaphtholsPeptidesPhenazinesPolycyclic Aromatic HydrocarbonsPolyketidesThioamidesBiological ProductsChromansclosthioamideclostrubinmethanophenazinenaphthalecinNaphtholsPeptidesPhenazinesPolycyclic Aromatic HydrocarbonsPolyketidesThioamidesAnaerobic organismAntibioticGenome miningSecondary metabolite

Identifiers

PMID30284140
PMCPMC6516742
OpenAlexW2895152773

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.