Evidence map›Paper›PMID 30283710›Full record

ArticleWorld journal of gastrointestinal pathophysiology2018

Gut microbiome profiling and colorectal cancer in African Americans and Caucasian Americans.

Lulu Farhana, Fadi Antaki, Farhan Murshed, Hamidah Mahmud, Stephanie L Judd, Pratima Nangia-Makker, Edi Levi, Yingjie Yu, Adhip Pn Majumdar

Open access · diamondAbstract read
In one paragraph

Article in World journal of gastrointestinal pathophysiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 1 synthesis or guideline pooled it, 82 citations in OpenAlex.

  1. Pooled it
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  6. The Translational Research Program in Cancer Differences across Populations.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2025
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  13. Enrichment of Bacteroides fragilis and enterotoxigenic Bacteroides fragilis in CpG island methylator phenotype-high colorectal carcinoma.Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Lulu FarhanaDepartment of Internal Medicine, John D Dingell Veterans Affairs Medical Center, Detroit, MI 48201, United States.
Fadi AntakiDepartment of Internal Medicine, Wayne State University School of Medicine, Detroit, MI 48201, United States.
Farhan MurshedDepartment of Internal Medicine, John D Dingell Veterans Affairs Medical Center, Detroit, MI 48201, United States.
Hamidah MahmudDepartment of Internal Medicine, John D Dingell Veterans Affairs Medical Center, Detroit, MI 48201, United States.
Stephanie L JuddDivision of Gastroenterology, John D Dingell VA Medical Center, Detroit, MI 48201, United States.
Pratima Nangia-MakkerDepartment of Internal Medicine, John D Dingell Veterans Affairs Medical Center, Detroit, MI 48201, United States.
Edi LeviDepartment of Pathology Service, John D Dingell VA Medical Center, Detroit, MI 48201, United States.
Yingjie YuDepartment of Internal Medicine, John D Dingell Veterans Affairs Medical Center, Detroit, MI 48201, United States.
Adhip Pn MajumdarDepartment of Internal Medicine, John D Dingell Veterans Affairs Medical Center, Detroit, MI 48201, United States. a.majumdar@wayne.edu.
The Barbara Ann Karmanos Cancer Institute · USCreative Research Enterprises (United States) · US

Funding

Racial Disparity in Colorectal Cancer: Molecular MechanismsR21CA175916 · NCI · WAYNE STATE UNIVERSITY · PI MAJUMDAR, ADHIP P. N. · 2013 to 2014
$297k
BLRD VA I01 BX001927NCI NIH HHS R21 CA175916
6 · The paper itself

Abstract

aimTo determine whether and to what extent the gut microbiome is involved in regulating racial disparity in colorectal cancer (CRC).

methodsAll patients were recruited and experiments were performed in accordance with the relevant guidelines and regulations by the Institutional Review Boards (IRB), committees of the John D. Dingell VAMC and Wayne State University guidelines. African American (AA) and Caucasian American (CA) patients were scheduled for an outpatient screening for colonoscopy, and no active malignancy volunteer patients were doubly consented, initially by the gastroenterologist and later by the study coordinator, for participation in the study. The gut microbial communities in colonic effluents from AAs and CAs were examined using 16sRNA profiling, and bacterial identifications were validated by performing SYBR-based Real Time PCR. For metagenomic analysis to characterize the microbial communities, multiple software/tools were used, including Metastats and R statistical software.

resultsIt is generally accepted that the incidence and mortality of CRC is higher in AAs than in CAs. However, the reason for this disparity is not well understood. We hypothesize that the gut microbiome plays a role in regulating this disparity. Indeed, we found significant differences in species richness and diversity between AAs and CAs.

conclusionOur current investigation, for the first time, demonstrates microbial dysbiosis between AAs and CAs, which could contribute to the racial disparity of CRC.

Indexed as

16S RNA profilingAfrican AmericansColorectal cancerFusobacterium nucleatumHuman gutMetagenomicsMicrobiome

Identifiers

PMID30283710
PMCPMC6163128
OpenAlexW2893573900

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.