Evidence map›Paper›PMID 30283056›Full record

ArticleScientific reports2018

Antarctic marine ciliates under stress: superoxide dismutases from the psychrophilic Euplotes focardii are cold-active yet heat tolerant enzymes.

Alessandro Pischedda, Kesava Priyan Ramasamy, Marco Mangiagalli, Federica Chiappori, Luciano Milanesi, Cristina Miceli, Sandra Pucciarelli, Marina Lotti

Abstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Article
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  5. Article
  6. Structure andOpen biology · 2021
    Article
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  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Review
  14. Endolysins from AntarcticMarine drugs · 2020
    Article
  15. Article
  16. Article
  17. Article
  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Alessandro PischeddaDepartment of Biotechnology and Biosciences, University of Milano-Bicocca, Piazza della Scienza 2, 20126, Milano, Italy.
Kesava Priyan RamasamySchool of Biosciences and Veterinary Medicine, University of Camerino, Via Gentile III da Varano, 1, 62032, Camerino (MC), Italy.
Marco MangiagalliDepartment of Biotechnology and Biosciences, University of Milano-Bicocca, Piazza della Scienza 2, 20126, Milano, Italy.ORCID http://orcid.org/0000-0001-8211-165X
Federica ChiapporiInstitute of Biomedical Technologies - CNR, Segrate (MI), Italy.ORCID http://orcid.org/0000-0001-8099-4348
Luciano MilanesiInstitute of Biomedical Technologies - CNR, Segrate (MI), Italy.ORCID http://orcid.org/0000-0002-1201-3939
Cristina MiceliSchool of Biosciences and Veterinary Medicine, University of Camerino, Via Gentile III da Varano, 1, 62032, Camerino (MC), Italy.
Sandra PucciarelliSchool of Biosciences and Veterinary Medicine, University of Camerino, Via Gentile III da Varano, 1, 62032, Camerino (MC), Italy. sandra.pucciarelli@unicam.it.
Marina LottiDepartment of Biotechnology and Biosciences, University of Milano-Bicocca, Piazza della Scienza 2, 20126, Milano, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Oxidative stress is a particularly severe threat to Antarctic marine polar organisms because they are exposed to high dissolved oxygen and to intense UV radiation. This paper reports the features of three superoxide dismutases from the Antarctic psychrophilic ciliate Euplotes focardii that faces two environmental challenges, oxidative stress and low temperature. Two out of these are Cu,Zn superoxide dismutases (named Ef-SOD1a and Ef-SOD1b) and one belongs to the Mn-containing group (Ef-SOD2). Ef-SOD1s and Ef-SOD2 differ in their evolutionary history, expression and overall structural features. Ef-SOD1 genes are expressed at different levels, with Ef-SOD1b mRNA 20-fold higher at the ciliate optimal temperature of growth (4 °C). All Ef-SOD enzymes are active at 4 °C, consistent with the definition of cold-adapted enzymes. At the same time, they display temperatures of melting in the range 50-70 °C and retain residual activity after incubation at 65-75 °C. Supported by data of molecular dynamics simulation, we conclude that the E. focardii SODs combine cold activity, local molecular flexibility and thermo tolerance.

Indexed as

Adaptation, PhysiologicalAmino Acid SequenceAntarctic RegionsCiliophoraCold TemperatureEuplotesMolecular Dynamics SimulationOxidative StressRNA, MessengerSuperoxide DismutaseThermotoleranceUltraviolet RaysRNA, MessengerSuperoxide Dismutase

Identifiers

PMID30283056
PMCPMC6170424

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.