Evidence map›Paper›PMID 30281424›Full record

ArticleIEEE transactions on bio-medical engineering2019

Deep Learning Models Unveiled Functional Difference Between Cortical Gyri and Sulci.

Shu Zhang, Huan Liu, Heng Huang, Yu Zhao, Xi Jiang, Brook Bowers, Lei Guo, Xiaoping Hu, Mar Sanchez, Tianming Liu

Abstract read
In one paragraph

Article in IEEE transactions on bio-medical engineering, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  13. An investigation of CNN models for differentiating malignant from benign lesions using small pathologically proven datasets.Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Shu Zhang
Huan Liu
Heng Huang
Yu Zhao
Xi Jiang
Brook Bowers
Lei Guo
Xiaoping Hu
Mar Sanchez
Tianming Liu

Funding

Yerkes National Primate Research Center Role of type-I IFN in regulating COVID-19 induced inflammation and pathogenesisP51OD011132 · OD · EMORY UNIVERSITY · PI Joon Sup Lee · 2012 to 2026
$167.0M
Assessing Large-scale Connectivities in Prenatal Cocaine Exposure Affected BrainsR01DA033393 · NIDA · UNIVERSITY OF GEORGIA · PI HU, XIAOPING P, LIU, TIANMING · 2012 to 2016
$1.6M
Assessing Large-scale Brain Connectivities in Mild Cognitive ImpairmentR01AG042599 · NIA · UNIVERSITY OF GEORGIA · PI LIU, TIANMING · 2013 to 2017
$1.4M
NIA NIH HHS R01 AG042599NIDA NIH HHS R01 DA033393NIH HHS P51 OD011132
6 · The paper itself

Abstract

It is largely unknown whether there is functional role difference between cortical gyral and sulcal regions. Recent advancements in neuroimaging studies demonstrate clear difference of structural connection profiles in gyral and sulcal areas, suggesting possible functional role difference in these convex and concave cortical regions. To explore and confirm such possible functional difference, we design and apply a powerful deep learning model of convolutional neural networks (CNN) that has been proven to be superior in learning discriminative and meaningful patterns on fMRI. By using the CNN model, gyral and sulcal fMRI signals are learned and predicted, and the prediction performance is adopted to demonstrate the functional difference between gyri and sulci. By using the Human Connectome Project (HCP) fMRI data and macaque brain fMRI data, an average of 83% and 90% classification accuracy has been achieved to separate gyral/sulcal HCP task fMRI signals at the population and individual subject level, respectively; 81% and 86% classification accuracy for resting state fMRI signals at the group and individual subject level, respectively. In addition, 78% classification accuracy has been achieved to separate gyral/sulcal resting state fMRI signals in macaque brains. Importantly, further analysis reveals that the discriminative features that are learned by CNNs to differentiate gyral/sulcal fMRI signals can be meaningfully interpreted, thus unveiling the fundamental functional difference between cortical gyri and sulci. That is, gyri are more global functional integration centers with simpler lower frequency signal components, while sulci are more local processing units with more complex higher frequency signal components.

Indexed as

Deep LearningSignal Processing, Computer-AssistedAdultAlgorithmsAnimalsCerebral CortexConnectomeFemaleHumansMacacaMagnetic Resonance ImagingMaleMiddle AgedYoung Adult

Identifiers

PMID30281424
PMCPMC6500590

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.