Evidence map›Paper›PMID 30280955›Full record

ReviewCritical reviews in biochemistry and molecular biology2018

Transcriptional quiescence in primordial germ cells.

Lyubov A Lebedeva, Konstantin V Yakovlev, Eugene N Kozlov, Paul Schedl, Girish Deshpande, Yulii V Shidlovskii

Open access · greenAbstract readReview
In one paragraph

Review in Critical reviews in biochemistry and molecular biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 19 citations in OpenAlex.

  1. Hedgehog and Drosophila germ cell migration.Development (Cambridge, England) · 2025
    Review
  2. Article
  3. Article
  4. The Embryonic Origin of Primordial Germ Cells in the TardigradebioRxiv : the preprint server for biology · 2023
    Article
  5. Article
  6. Germline stem cells in human.Signal transduction and targeted therapy · 2022
    Review
  7. Article
  8. Chemical Genetics: Manipulating the Germline with Small Molecules.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Lyubov A Lebedevaa Institute of Gene Biology , Russian Academy of Sciences , Moscow , Russia.ORCID 0000-0002-8373-0783
Konstantin V Yakovleva Institute of Gene Biology , Russian Academy of Sciences , Moscow , Russia.
Eugene N Kozlova Institute of Gene Biology , Russian Academy of Sciences , Moscow , Russia.
Paul Schedla Institute of Gene Biology , Russian Academy of Sciences , Moscow , Russia.
Girish Deshpandec Department of Molecular Biology , Princeton University , Princeton , USA.ORCID 0000-0002-5200-7090
Yulii V Shidlovskiia Institute of Gene Biology , Russian Academy of Sciences , Moscow , Russia.ORCID 0000-0002-3643-9889
Institute of Gene Biology · RUPrinceton University · USSechenov University · RU

Funding

Genetic regulatory mechanism in development and differentiationR35GM126975 · NIGMS · PRINCETON UNIVERSITY · PI SCHEDL, PAUL D · 2018 to 2022
$3.0M
Unexpected roles for BMP signaling in the specification of the embryonic germlineR01GM110015 · NIGMS · PRINCETON UNIVERSITY · PI SCHEDL, PAUL D · 2014 to 2017
$1.2M
Involvement of calcium channels in directed germ cell migrationR21HD093913 · NICHD · PRINCETON UNIVERSITY · PI SCHEDL, PAUL D · 2018 to 2019
$446k
NICHD NIH HHS R21 HD093913NIGMS NIH HHS R01 GM110015NIGMS NIH HHS R35 GM126975
6 · The paper itself

Abstract

In most animal species, newly formed primordial germ cells (PGCs) acquire the special characteristics that distinguish them from the surrounding somatic cells. Proper fate specification of the PGCs is coupled with transcriptional quiescence, whether they are segregated by determinative or inductive mechanisms. Inappropriate differentiation of PGCs into somatic cells is thought to be prevented due to repression of RNA polymerase (Pol) II-dependent transcription. In the case of a determinative mode of PGC formation (Drosophila, Caenorhabditis elegans, etc.), there is a broad downregulation of Pol II activity. By contrast, PGCs display only gene-specific repression in organisms that rely on inductive signaling-based mechanism (e.g., mice). In addition to the global block of Pol II activity in PGCs, gene expression can be suppressed in other ways, such as chromatin remodeling and Piwi-mediated RNAi. Here, we discuss the mechanisms responsible for the transcriptionally silent state of PGCs in common experimental animals, such as Drosophila, C. elegans, Danio rerio, Xenopus, and mouse. While a PGC-specific downregulation of transcription is a common feature among these organisms, the diverse nature of underlying mechanisms suggests that this functional trait likely evolved independently on several instances. We discuss the possible biological relevance of these silencing mechanisms vis-a-vis fate determination of PGCs.

Indexed as

AnimalsCell DifferentiationGene Expression RegulationGerm CellsMiceRNA Polymerase IITranscription, GeneticRNA Polymerase IIchromatin remodelingEmbryo developmentPiwi-mediated RNAiprimordial germ cellstranscriptional quiescence

Identifiers

PMID30280955
PMCPMC8729227
OpenAlexW2895347924

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.