Evidence map›Paper›PMID 30280702›Full record

ArticleJournal of physics. Condensed matter : an Institute of Physics journal2018

Protein refractive index increment is determined by conformation as well as composition.

Domarin Khago, Jan C Bierma, Kyle W Roskamp, Natalia Kozlyuk, Rachel W Martin

Abstract read
In one paragraph

Article in Journal of physics. Condensed matter : an Institute of Physics journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Plasmonic Single-Molecule Affinity Detection at 10Advanced materials (Deerfield Beach, Fla.) · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Domarin KhagoDepartment of Chemistry, University of California, Irvine, CA 92697, United States of America.
Jan C BiermaDepartment of Molecular Biology & Biochemistry, University of California, Irvine, CA 92697, United States of America.
Kyle W RoskampDepartment of Chemistry, University of California, Irvine, CA 92697, United States of America.
Natalia KozlyukDepartment of Chemistry, University of California, Irvine, CA 92697, United States of America.
Rachel W MartinDepartment of Chemistry, University of California, Irvine, CA 92697, United States of America.ORCID 0000-0001-9996-7411
University of California, Irvine · US

Funding

Solid-state NMR methods for investigating native and aggregated eye lens proteinsR01EY021514 · NEI · UNIVERSITY OF CALIFORNIA-IRVINE · PI MARTIN, RACHEL WAGNER · 2011 to 2022
$2.8M
Toward Molecular-Scale Models of Congenital and Age-Related Cataract: a Concerted Computational and Experimental ApproachR01EY025328 · NEI · UNIVERSITY OF CALIFORNIA-IRVINE · PI TOBIAS, DOUGLAS J · 2016 to 2018
$977k
NEI NIH HHS R01 EY021514NEI NIH HHS R01 EY025328
6 · The paper itself

Abstract

The refractive index gradient of the eye lens is controlled by the concentration and distribution of its component crystallin proteins, which are highly enriched in polarizable amino acids. The current understanding of the refractive index increment ([Formula: see text]) of proteins is described using an additive model wherein the refractivity and specific volume of each amino acid type contributes according to abundance in the primary sequence. Here we present experimental measurements of [Formula: see text] for crystallins from the human lens and those of aquatic animals under uniform solvent conditions. In all cases, the measured values are much higher than those predicted from primary sequence alone, suggesting that structural factors also contribute to protein refractive index.

Indexed as

RefractometryAnimalsCrystallinsHumansProtein ConformationCrystallins

Identifiers

PMID30280702
PMCPMC6387658
OpenAlexW2891516556

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.