Evidence map›Paper›PMID 30279570›Full record

ArticleScientific reports2018

Reconstructing the evolutionary history of pandemic foot-and-mouth disease viruses: the impact of recombination within the emerging O/ME-SA/Ind-2001 lineage.

Katarzyna Bachanek-Bankowska, Antonello Di Nardo, Jemma Wadsworth, Valerie Mioulet, Giulia Pezzoni, Santina Grazioli, Emiliana Brocchi, Sharmila Chapagain Kafle, Ranjani Hettiarachchi, Pradeep Lakpriya Kumarawadu and 20 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
11.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 83 citations in OpenAlex.

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  8. Wild Fauna in Oman: Foot-and-Mouth Disease Outbreak in Arabyan Oryx (Animals : an open access journal from MDPI · 2025
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  9. Review
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  14. Molecular characterization ofVeterinary world · 2024
    Article
  15. Multiple incursions of foot-and-mouth disease virus serotype O into the Republic of Korea between 2010 and 2019.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors at 13 institutions in 13 countries.

Katarzyna Bachanek-BankowskaThe Pirbright Institute, Pirbright, Woking, Surrey, United Kingdom. Kasia.Bachanek-Bankowska@pirbright.ac.uk.
Antonello Di NardoThe Pirbright Institute, Pirbright, Woking, Surrey, United Kingdom.
Jemma WadsworthThe Pirbright Institute, Pirbright, Woking, Surrey, United Kingdom.
Valerie MiouletThe Pirbright Institute, Pirbright, Woking, Surrey, United Kingdom.
Giulia PezzoniIstituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna, Brescia, Italy.
Santina GrazioliIstituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna, Brescia, Italy.
Emiliana BrocchiIstituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna, Brescia, Italy.
Sharmila Chapagain KafleCentral Veterinary Laboratory, Department of Livestock Services, Ministry of Agricultural Development, Veterinary Complex Tripureshwor, Kathmandu, Nepal.
Ranjani HettiarachchiDepartment of Animal Production and Health, Gatambe, Peradeniya, Sri Lanka.
Pradeep Lakpriya KumarawaduDepartment of Animal Production and Health, Gatambe, Peradeniya, Sri Lanka.
Ibrahim M EldaghayesFaculty of Veterinary Medicine, University of Tripoli, Tripoli, Libya.ORCID http://orcid.org/0000-0002-1750-1448
Abdunaser S DayhumFaculty of Veterinary Medicine, University of Tripoli, Tripoli, Libya.
Deodass MeenowaLivestock and Veterinary Division, Animal Health Laboratory, Reduit, Mauritius.
Soufien SghaierVirology department, Institut de la Recherche Vétérinaire de Tunisie, La Rabta, Tunis, Tunisia.ORCID http://orcid.org/0000-0003-3608-9919
Hafsa MadaniVirology department, Laboratoire Central Vétérinaire d'Alger, Institut National de la Médecine Vétérinaire, Algiers, Algeria.
Nabil AbouchoaibLaboratoire Regional d'Analyses et de Recherches de Casablanca, Casablanca, Morocco.
Bui Huy HoangRegional Animal Health Office No.6, Department of Animal Health, Ministry of Agriculture and Rural Development, Ho Chi Minh City, Vietnam.
Pham Phong VuRegional Animal Health Office No.6, Department of Animal Health, Ministry of Agriculture and Rural Development, Ho Chi Minh City, Vietnam.
Kinzang DukpaDepartment of Livestock, National Centre for Animal Health, Thimphu, Bhutan.
Ratna Bahadur GurungDepartment of Livestock, National Centre for Animal Health, Thimphu, Bhutan.
Sangay TenzinDepartment of Livestock, National Centre for Animal Health, Thimphu, Bhutan.
Ulrich WerneryCentral Veterinary Research Laboratory, Dubai, United Arab Emirates.
Alongkorn PanthumartRegional Reference Laboratory for Foot-and-Mouth Disease in South-East Asia, Department of Livestock Development, Pakchong, Thailand.
Kingkarn Boonsuya SeeyoRegional Reference Laboratory for Foot-and-Mouth Disease in South-East Asia, Department of Livestock Development, Pakchong, Thailand.
Wilai LinchongsubongkochRegional Reference Laboratory for Foot-and-Mouth Disease in South-East Asia, Department of Livestock Development, Pakchong, Thailand.
Anthony RelmyLaboratoire de santé animale, UMR Virologie, INRA, Ecole Nationale Vétérinaire d'Alfort, ANSES, Université Paris-Est, Maisons-Alfort Cedex, France.
Labib Bakkali-KassimiLaboratoire de santé animale, UMR Virologie, INRA, Ecole Nationale Vétérinaire d'Alfort, ANSES, Université Paris-Est, Maisons-Alfort Cedex, France.
Alexei ScherbakovFederal Governmental Budgetary Institution "Federal Centre for Animal Health" (FGBI "ARRIAH"), Yur'evets, Vladimir, Russia.
Donald P KingThe Pirbright Institute, Pirbright, Woking, Surrey, United Kingdom.
Nick J KnowlesThe Pirbright Institute, Pirbright, Woking, Surrey, United Kingdom.
The Pirbright Institute · GBCentre for Bhutan Studies and GNH Research · BTIstituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna "Bruno Ubertini" · ITÉcole Nationale Vétérinaire d'Alfort · FRMinistry of Agriculture and Rural Development · VNUniversity of Peradeniya · LKUniversity of Tripoli · LYAgence Nationale de Sécurité Sanitaire de l’Alimentation, de l’Environnement et du Travail · FRAll-Russian Research Institute for Animal Health · RUCentral Veterinary Research Laboratory · AEGovernment of Nepal · NPHigher National Veterinary School · DZHôpital La Rabta · TN

Funding

Biotechnology and Biological Sciences Research Council BBS/E/I/00007036Biotechnology and Biological Sciences Research Council (BBSRC) BB/E/I/00007035Biotechnology and Biological Sciences Research Council (BBSRC) BB/E/I/00007036
6 · The paper itself

Abstract

Foot-and-mouth disease (FMD) is a highly contagious disease of livestock affecting animal production and trade throughout Asia and Africa. Understanding FMD virus (FMDV) global movements and evolution can help to reconstruct the disease spread between endemic regions and predict the risks of incursion into FMD-free countries. Global expansion of a single FMDV lineage is rare but can result in severe economic consequences. Using extensive sequence data we have reconstructed the global space-time transmission history of the O/ME-SA/Ind-2001 lineage (which normally circulates in the Indian sub-continent) providing evidence of at least 15 independent escapes during 2013-2017 that have led to outbreaks in North Africa, the Middle East, Southeast Asia, the Far East and the FMD-free islands of Mauritius. We demonstrated that sequence heterogeneity of this emerging FMDV lineage is accommodated within two co-evolving divergent sublineages and that recombination by exchange of capsid-coding sequences can impact upon the reconstructed evolutionary histories. Thus, we recommend that only sequences encoding the outer capsid proteins should be used for broad-scale phylogeographical reconstruction. These data emphasise the importance of the Indian subcontinent as a source of FMDV that can spread across large distances and illustrates the impact of FMDV genome recombination on FMDV molecular epidemiology.

Indexed as

Africa, NorthernAnimalsAsiaCapsid ProteinsEvolution, MolecularFoot-and-Mouth DiseaseFoot-and-Mouth Disease VirusGenome, ViralMauritiusMolecular EpidemiologyPandemicsPhylogeographyRecombination, GeneticCapsid ProteinsVP1 protein, Foot-and-mouth disease virus

Identifiers

PMID30279570
PMCPMC6168464
OpenAlexW2892494817

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.