Evidence map›Paper›PMID 30279485›Full record

ArticleNature communications2018

RIP2 filament formation is required for NOD2 dependent NF-κB signalling.

Erika Pellegrini, Ambroise Desfosses, Arndt Wallmann, Wiebke Manuela Schulze, Kristina Rehbein, Philippe Mas, Luca Signor, Stephanie Gaudon, Grasilda Zenkeviciute, Michael Hons and 6 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 93 citations in OpenAlex.

  1. Article
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  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Review
  10. Ripks and Neuroinflammation.Molecular neurobiology · 2024
    Review
  11. Review
  12. Article
  13. Article
  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 3 countries.

Erika PellegriniEuropean Molecular Biology Laboratory, 71 Avenue des Martyrs, CS 90181, 38042, Grenoble, Cedex 9, France.
Ambroise DesfossesUniv. Grenoble Alpes, CNRS, CEA, CNRS, IBS, F-38000, Grenoble, France.
Arndt WallmannLeibniz-Forschungsinstitut für Molekulare Pharmakologie (FMP), Department for NMR-supported Structural, Biology Robert-Rössle-Straße 10, 13125, Berlin, Germany.
Wiebke Manuela SchulzeEuropean Molecular Biology Laboratory, 71 Avenue des Martyrs, CS 90181, 38042, Grenoble, Cedex 9, France.
Kristina RehbeinLeibniz-Forschungsinstitut für Molekulare Pharmakologie (FMP), Department for NMR-supported Structural, Biology Robert-Rössle-Straße 10, 13125, Berlin, Germany.
Philippe MasUniv. Grenoble Alpes, CNRS, CEA, CNRS, IBS, F-38000, Grenoble, France.
Luca SignorUniversity Grenoble Alpes, CEA, CNRS, IBS, F-38000, Grenoble, France.ORCID http://orcid.org/0000-0003-3880-2466
Stephanie GaudonEuropean Molecular Biology Laboratory, 71 Avenue des Martyrs, CS 90181, 38042, Grenoble, Cedex 9, France.
Grasilda ZenkeviciuteEuropean Molecular Biology Laboratory, 71 Avenue des Martyrs, CS 90181, 38042, Grenoble, Cedex 9, France.
Michael HonsEuropean Molecular Biology Laboratory, 71 Avenue des Martyrs, CS 90181, 38042, Grenoble, Cedex 9, France.
Helene MaletUniv. Grenoble Alpes, CNRS, CEA, CNRS, IBS, F-38000, Grenoble, France.
Irina GutscheUniv. Grenoble Alpes, CNRS, CEA, CNRS, IBS, F-38000, Grenoble, France.
Carsten SachseEuropean Molecular Biology Laboratory, Structural and Computational Biology Unit, Meyerhofstraße 1, 69117, Heidelberg, Germany.ORCID http://orcid.org/0000-0002-1168-5143
Guy SchoehnUniv. Grenoble Alpes, CNRS, CEA, CNRS, IBS, F-38000, Grenoble, France.ORCID http://orcid.org/0000-0002-1459-3201
Hartmut OschkinatLeibniz-Forschungsinstitut für Molekulare Pharmakologie (FMP), Department for NMR-supported Structural, Biology Robert-Rössle-Straße 10, 13125, Berlin, Germany.
Stephen CusackEuropean Molecular Biology Laboratory, 71 Avenue des Martyrs, CS 90181, 38042, Grenoble, Cedex 9, France. cusack@embl.fr.ORCID http://orcid.org/0000-0002-9324-0796
Centre National de la Recherche Scientifique · FREuropean Molecular Biology Laboratory · FRLeibniz-Forschungsinstitut für Molekulare Pharmakologie · DEBridge University · SSEuropean Molecular Biology Laboratory · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Activation of the innate immune pattern recognition receptor NOD2 by the bacterial muramyl-dipeptide peptidoglycan fragment triggers recruitment of the downstream adaptor kinase RIP2, eventually leading to NF-κB activation and proinflammatory cytokine production. Here we show that full-length RIP2 can form long filaments mediated by its caspase recruitment domain (CARD), in common with other innate immune adaptor proteins. We further show that the NOD2 tandem CARDs bind to one end of the RIP2 CARD filament, suggesting a mechanism for polar filament nucleation by activated NOD2. We combine X-ray crystallography, solid-state NMR and high-resolution cryo-electron microscopy to determine the atomic structure of the helical RIP2 CARD filament, which reveals the intermolecular interactions that stabilize the assembly. Using structure-guided mutagenesis, we demonstrate the importance of RIP2 polymerization for the activation of NF-κB signalling by NOD2. Our results could be of use to develop new pharmacological strategies to treat inflammatory diseases characterised by aberrant NOD2 signalling.

Indexed as

Caspase Activation and Recruitment DomainHEK293 CellsHumansNF-kappa BNod2 Signaling Adaptor ProteinProtein ConformationReceptor-Interacting Protein Serine-Threonine Kinase 2NF-kappa BNOD2 protein, humanNod2 Signaling Adaptor ProteinReceptor-Interacting Protein Serine-Threonine Kinase 2RIPK2 protein, human

Identifiers

PMID30279485
PMCPMC6168553
OpenAlexW2894448423

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.