Evidence map›Paper›PMID 30278289›Full record

ReviewCurrent opinion in genetics & development2018

From pattern to process: studies at the interface of gene regulatory networks, morphogenesis, and evolution.

Sarah Jacquelyn Smith, Mark Rebeiz, Lance Davidson

Abstract readReview
In one paragraph

Review in Current opinion in genetics & development, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Screening and transcriptomic analysis of anti-Frontiers in microbiology · 2025
    Article
  6. Article
  7. Article
  8. Generative models of morphogenesis in developmental biology.Seminars in cell & developmental biology · 2023
    Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Sarah Jacquelyn SmithUniversity of Pittsburgh Department of Biological Sciences, Pittsburgh, PA 15260, United States.
Mark RebeizUniversity of Pittsburgh Department of Biological Sciences, Pittsburgh, PA 15260, United States.
Lance DavidsonUniversity of Pittsburgh, Department of Bioengineering, Pittsburgh, PA 15260, United States. Electronic address: lad43@pitt.edu.

Funding

The Biomechanics of morphogenesis in the frogR01HD044750 · NICHD · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI DAVIDSON, LANCE A. · 2005 to 2020
$3.8M
Biomechanics of MorphogenesisR37HD044750 · NICHD · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI LANCE A. DAVIDSON · 2022 to 2026
$2.1M
Interaction between blood flow and ALK1 signaling in AVM developmentR01HL136566 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ROMAN, BETH L · 2017 to 2020
$1.7M
The evolution of a co-opted gene-regulatory network underlying a rapidly evolving morphological traitR01GM112758 · NIGMS · PRINCETON UNIVERSITY · PI ANDOLFATTO, PETER, REBEIZ, MARK J · 2016 to 2019
$1.7M
Tracing the recent origins of a gene network regulating a novel morphological strR01GM107387 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI REBEIZ, MARK J · 2014 to 2018
$1.6M
Mechanical Control of Mesenchymal-to-Epithelial TransitionR56HL134195 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI DAVIDSON, LANCE A. · 2016 to 2016
$550k
NHLBI NIH HHS R01 HL136566NHLBI NIH HHS R56 HL134195NICHD NIH HHS R01 HD044750NICHD NIH HHS R37 HD044750NIGMS NIH HHS R01 GM107387NIGMS NIH HHS R01 GM112758
6 · The paper itself

Abstract

The development of anatomical structures is complex, beginning with patterning of gene expression by multiple gene regulatory networks (GRNs). These networks ultimately regulate the activity of effector molecules, which in turn alter cellular behavior during development. Together these processes biomechanically produce the three-dimensional shape that the anatomical structure adopts over time. However, the interfaces between these processes are often overlooked and also include counter-intuitive feedback mechanisms. In this review, we examine each step in this extraordinarily complex process and explore how evolutionary developmental biology model systems, such as butterfly scales, vertebrate teeth, and the Drosophila dorsal appendage offer a complementary approach to expose the multifactorial integration of genetics and morphogenesis from an alternative perspective.

Indexed as

AnimalsBiological EvolutionBody PatterningDrosophilaExtremitiesGene Expression Regulation, DevelopmentalGene Regulatory NetworksModels, BiologicalMorphogenesisToothVertebrates

Identifiers

PMID30278289
PMCPMC6538285

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.