Evidence map›Paper›PMID 30277481›Full record

ArticleScientific data2018

Free-electron laser data for multiple-particle fluctuation scattering analysis.

Kanupriya Pande, Jeffrey J Donatelli, Erik Malmerberg, Lutz Foucar, Billy K Poon, Markus Sutter, Sabine Botha, Shibom Basu, R Bruce Doak, Katerina Dörner and 26 more

Abstract readDataset
PubMed Full text at PMC Publisher
In one paragraph

Article in Scientific data, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Ab initio structure determination from experimental fluctuation X-ray scattering data.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

36 authors.

Kanupriya PandeCenter for Advanced Mathematics in Energy Research Applications, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Jeffrey J DonatelliCenter for Advanced Mathematics in Energy Research Applications, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Erik MalmerbergCenter for Advanced Mathematics in Energy Research Applications, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Lutz FoucarMax-Planck-Institut für medizinische Forschung, Jahnstr. 29, 69120 Heidelberg, Germany.
Billy K PoonMolecular Biophysics and Integrated Bio-imaging, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Markus SutterMolecular Biophysics and Integrated Bio-imaging, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.ORCID 0000-0001-6290-4820
Sabine BothaMax-Planck-Institut für medizinische Forschung, Jahnstr. 29, 69120 Heidelberg, Germany.
Shibom BasuArizona State University, Tempe, AZ, USA.
R Bruce DoakMax-Planck-Institut für medizinische Forschung, Jahnstr. 29, 69120 Heidelberg, Germany.
Katerina DörnerArizona State University, Tempe, AZ, USA.
Sascha W EppMax Planck Advanced Study Group, Center for Free Electron Laser Science (CFEL), Notkestrasse 85, 22607 Hamburg, Germany.
Lars EnglertMax-Planck-Institut für extraterrestrische Physik, Giessenbachstrasse, 85741 Garching, Germany.
Raimund FrommeArizona State University, Tempe, AZ, USA.
Elisabeth HartmannMax-Planck-Institut für medizinische Forschung, Jahnstr. 29, 69120 Heidelberg, Germany.
Robert HartmannPNSensor GmbH, Otto-Hahn-Ring 6, 81739 München, Germany.
Guenter HauserMax-Planck-Institut für extraterrestrische Physik, Giessenbachstrasse, 85741 Garching, Germany.
Johan HattneMolecular Biophysics and Integrated Bio-imaging, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.ORCID 0000-0002-8936-0912
Ahmad HosseinizadehDepartment of Physics, University of Wisconsin-Milwaukee, 3135N. Maryland Ave, Milwaukee, WI 53211, USA.
Stephan KassemeyerMax-Planck-Institut für medizinische Forschung, Jahnstr. 29, 69120 Heidelberg, Germany.
Lukas LombMax-Planck-Institut für medizinische Forschung, Jahnstr. 29, 69120 Heidelberg, Germany.
Sebastian F Carron MonteroLinac Coherent Light Source, SLAC National Accelerator Laboratory, Stanford, CA, USA.
Andreas MenzelLaboratory for Macromolecules and Bioimaging, Paul Scherrer Institute, 5232 Villigen - PSI, Switzerland.ORCID 0000-0002-0489-609X
Daniel RollesMax-Planck-Institut für medizinische Forschung, Jahnstr. 29, 69120 Heidelberg, Germany.
Artem RudenkoMax Planck Advanced Study Group, Center for Free Electron Laser Science (CFEL), Notkestrasse 85, 22607 Hamburg, Germany.
Marvin M SeibertLinac Coherent Light Source, SLAC National Accelerator Laboratory, Stanford, CA, USA.
Raymond George SierraLinac Coherent Light Source, SLAC National Accelerator Laboratory, Stanford, CA, USA.
Peter SchwanderDepartment of Physics, University of Wisconsin-Milwaukee, 3135N. Maryland Ave, Milwaukee, WI 53211, USA.
Abbas OurmazdDepartment of Physics, University of Wisconsin-Milwaukee, 3135N. Maryland Ave, Milwaukee, WI 53211, USA.ORCID 0000-0001-9946-3889
Petra FrommeMax-Planck-Institut für Kernphysik, Saupfercheckweg 1, 69117 Heidelberg, Germany.
Nicholas K SauterMolecular Biophysics and Integrated Bio-imaging, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Michael BoganLinac Coherent Light Source, SLAC National Accelerator Laboratory, Stanford, CA, USA.
John BozekLinac Coherent Light Source, SLAC National Accelerator Laboratory, Stanford, CA, USA.
Christoph BostedtLinac Coherent Light Source, SLAC National Accelerator Laboratory, Stanford, CA, USA.
Ilme SchlichtingMax-Planck-Institut für medizinische Forschung, Jahnstr. 29, 69120 Heidelberg, Germany.ORCID 0000-0002-0936-7496
Cheryl A KerfeldMolecular Biophysics and Integrated Bio-imaging, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Petrus H ZwartCenter for Advanced Mathematics in Energy Research Applications, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.

Funding

DIALS: New Computational Methods to Enable Challenging Crystallographic ExperimentsR01GM117126 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI SAUTER, NICHOLAS K · 2016 to 2023
$6.1M
Femtosecond nano-crystallography of membrane proteinsR01GM095583 · NIGMS · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI FROMME, PETRA · 2010 to 2023
$4.3M
Rapid Low-Cost Paper-based Biodosimetry that reveals individual organ injuriesU01AI148319 · NIAID · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI LABAER, JOSHUA · 2020 to 2024
$2.5M
The Development of Computational Methods for Fluctuation Xray ScatteringR01GM109019 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI ZWART, PETRUS H · 2014 to 2018
$1.9M
NIAID NIH HHS U01 AI148319NIGMS NIH HHS R01 GM095583NIGMS NIH HHS R01 GM109019NIGMS NIH HHS R01 GM117126
6 · The paper itself

Abstract

Fluctuation X-ray scattering (FXS) is an emerging experimental technique in which solution scattering data are collected using X-ray exposures below rotational diffusion times, resulting in angularly anisotropic X-ray snapshots that provide several orders of magnitude more information than traditional solution scattering data. Such experiments can be performed using the ultrashort X-ray pulses provided by a free-electron laser source, allowing one to collect a large number of diffraction patterns in a relatively short time. Here, we describe a test data set for FXS, obtained at the Linac Coherent Light Source, consisting of close to 100 000 multi-particle diffraction patterns originating from approximately 50 to 200 Paramecium Bursaria Chlorella virus particles per snapshot. In addition to the raw data, a selection of high-quality pre-processed diffraction patterns and a reference SAXS profile are provided.

Indexed as

PhycodnaviridaeScattering, Small AngleX-Ray Diffraction

Identifiers

PMID30277481
PMCPMC6167951

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.