Evidence map›Paper›PMID 30276714›Full record

ArticleApplied microbiology and biotechnology2018

Transcriptome analysis of the response of silkworm to drastic changes in ambient temperature.

Huizhen Guo, Chunlin Huang, Liang Jiang, Tingcai Cheng, Tieshan Feng, Qingyou Xia

Abstract read
PubMed Publisher
In one paragraph

Article in Applied microbiology and biotechnology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
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  8. Distinct Functions ofFrontiers in immunology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Huizhen GuoState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing, 400715, China.
Chunlin HuangState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing, 400715, China.
Liang JiangState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing, 400715, China. jiangliang@swu.edu.cn.
Tingcai ChengState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing, 400715, China.
Tieshan FengState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing, 400715, China.
Qingyou XiaState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing, 400715, China. xiaqy@swu.edu.cn.
Southwest University · CNState Key Laboratory of Silkworm Genomic Biology

Funding

Basic Science and Frontier Technology Research of Chongqing cstc2018jcyjAX0211, cstc2016jcyjA0524Basic Science and Frontier Technology Research of Chongqing cstc2018jcyjAX0487National Natural Science Foundation of China 31501875National Natural Science Foundation of China 31802014
6 · The paper itself

Abstract

Bombyx mori is a poikilothermic insect and is economically important for silk production. Drastic changes in the ambient temperature have a negative impact on sericulture. However, the reason as to why high temperature is associated with the occurrence of diseases in silkworm and the response of silkworm to low temperature remain unclear and were the focus of the present study. Dazao silkworm exposed to 13 °C (DZ-13), 25 °C (DZ-25), and 37 °C (DZ-37) were used for RNA-seq analysis. There were 478 and 194 upregulated differentially expressed genes (DEGs) in DZ-13 and DZ-37 while 49 and 273 downregulated DEGs in DZ-13 and DZ-37, respectively. Eight DEGs were co-upregulated, in which seven genes were for heat shock proteins (Hsps), implying that Hsps play important roles in the tolerance of silkworm to high and low temperature. Gene ontology analysis revealed that the developmental process was downregulated in DZ-13. All the DEGs in the oxidative phosphorylation and insulin signaling pathways were upregulated in DZ-13. Several cuticular proteins and ATP synthesis-related genes were upregulated in DZ-13, suggesting that thickening of the cuticle and increase in the ATPase expression would help silkworms to protect themselves from low temperature-induced stress. Several immune-related genes, such as BmRel and BmSerpin-2, were downregulated in DZ-37, revealing that the resistance of silkworm is decreased under high temperature shock resulting in susceptibility to pathogens. Thus, the increase in the thermo-tolerance of silkworm should be related to the enhancement in the pathogen resistance.

Indexed as

Gene Expression ProfilingHot TemperatureAnimalsBombyxDNA ReplicationGene Expression RegulationGene OntologyHeat-Shock ProteinsInsect ProteinsSequence Analysis, RNASignal TransductionSilkStress, PhysiologicalHeat-Shock ProteinsInsect ProteinsSilkDisease resistanceHeat shock proteinsHigh temperatureLow temperatureSilkwormTranscriptome

Identifiers

PMID30276714
OpenAlexW2894744222

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.